Transcript Information: R_Transcript_27046.p1


Annotated TAIR IDAT1G03140.1
Annotated Gene Namesplicing factor Prp18 family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:754471-756223 | Reverse length=420
E-Value4.4E-196
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.87775668422
Replicate 214.630673884218
Replicate 315.121807215064
Condition 2: 8 Hour
Replicate 117.002409890019
Replicate 219.408589373156
Replicate 321.169482312774
Condition 3: 24 Hour
Replicate 120.824808023174
Replicate 216.069601832254
Replicate 319.2654613381


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_27046.p1 GENE.R_Transcript_27046~~R_Transcript_27046.p1 ORF type:3prime_partial len:409 (+),score=102.43,Prp18|PF02840.11|1.2e+03,Prp18|PF02840.11|2.1e-60,PRP4|PF08799.7|1.7e-12 R_Transcript_27046:131-1354(+)
ATGGACCTCTTGAAACAAGAAATACTGAAAAAGCGAAAAGCCCTAGCGGAAGAGACTGGGGGGAAAAGATTCTTTAAGCGCTCTGAGATTGAGCAGAAACGTCTCCAGAAGCTCCGGGAGGAGGAGCAACGTGAGCTCGAAGAGAAATCCTTGCGCATGCAACAACAATCCTCCACTTCTGCTGCTTCCACTGCATCGCTCCTCGACCTTATCTACTCCTCCAAGTCAAACCTTGATTCCTCCTCGAAATCTGTTACTCCTTCTGCGGATGAGCAGAGAATCGACGACCTGAACCTCCCGAAACAAGAAGTGATTCGACGCCTTCGGTTTCTCAAACAACCAATCACTCTCTTTGGTGAAGATGATCAAGCTAGATTGGACCGCTTGAAGTATGTCCTTAAGGCTGGTGCCTTTGAGGTGGATAGTGACATGACAGAGGGGCAGACGAACGATTTCTTGCGTGATATTGTTGAGTTGAAGAAGCGGCAAAAAACAGGAATCCTTAGTGACAGAAAGAGAAAGAATGAGGATTTGGAGGATGGAGAGGGTGGGAAGGGTGATGATGACCTCAGTGGGGAGGGGGCTTCATCTGGGGTTGATGCGGACAAGGATCTAAAGCTAATGAAAGCAAAATTTGAGGATTTATGTGATGAGGATAAGATACTTGTGTTCTTCAAGAGGCTACTGAATGAGTGGAATCAGGAGTTGAATGAGATGCCAGAAGTGAGGCGGACAGCTAAAGGAAAGCAGATGGTTGCCACATTCAAGCAGTGTGCTCGGTATCTGACTCCGTTGTTCAAATTCTGCAGGAAGAAGGCTCTCCCTGATGACATTAAACAATCATTGATGTTGGTAGTGAACTGCTGTCTGGAGAGAGACTATCGAACTGCAGTGGATCACTATATCAAGATGGCCATTGGGAATGCACCCTGGCCTATTGGGGTTACTATGGTTGGTATCCACGAACGTTCTGCTCGGGAGAAGATCTACACCAACAGTGTTGCTCATATCATGAATGATGAAACCACCCGTAAATACCTACAGTCTGTCAAACGGTTGGTGACTTTTTGCCAACGCAAGTACCCAACTGTGCCATCTAAATCGATTGAATTCAACAGCTTGGCAAACGGTAGTGATTTGCAGTCATTGTTGATGAATGAGGGATACTCTGGAGAAGGGAGTCAGGCTTCAGAGGAACGACTTCAGTTGATGCCTGCTCCAAGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_27046.p1 GENE.R_Transcript_27046~~R_Transcript_27046.p1 ORF type:3prime_partial len:409 (+),score=102.43,Prp18|PF02840.11|1.2e+03,Prp18|PF02840.11|2.1e-60,PRP4|PF08799.7|1.7e-12 R_Transcript_27046:131-1354(+)
MDLLKQEILKKRKALAEETGGKRFFKRSEIEQKRLQKLREEEQRELEEKSLRMQQQSSTSAASTASLLDLIYSSKSNLDSSSKSVTPSADEQRIDDLNLPKQEVIRRLRFLKQPITLFGEDDQARLDRLKYVLKAGAFEVDSDMTEGQTNDFLRDIVELKKRQKTGILSDRKRKNEDLEDGEGGKGDDDLSGEGASSGVDADKDLKLMKAKFEDLCDEDKILVFFKRLLNEWNQELNEMPEVRRTAKGKQMVATFKQCARYLTPLFKFCRKKALPDDIKQSLMLVVNCCLERDYRTAVDHYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLVTFCQRKYPTVPSKSIEFNSLANGSDLQSLLMNEGYSGEGSQASEERLQLMPAPR

Click here to download the sequence:
Link to NCBI Protein BLAST