Transcript Information: R_Transcript_270462.p1


Annotated TAIR IDAT1G14420.1
Annotated Gene NamePectate lyase family protein
Annotated Gene Symbol(s)AT59
Annotation TypeOrtholog
Chromosome Positionchr1:4931844-4933405 | Reverse length=459
E-Value4.3E-181
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.9476706590486
Replicate 20.90051852801278
Replicate 31.2409970706719
Condition 2: 8 Hour
Replicate 12.155640480683
Replicate 21.7161850623032
Replicate 31.6799459039184
Condition 3: 24 Hour
Replicate 11.2955873153332
Replicate 21.0952950239113
Replicate 30.098815822514209


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_270462.p1 GENE.R_Transcript_270462~~R_Transcript_270462.p1 ORF type:5prime_partial len:443 (+),score=64.68,Pec_lyase_C|PF00544.15|1.5e-18,Pec_lyase_N|PF04431.9|8.4e-19,Alpha-amyl_C2|PF07821.8|1.1e-05,Alpha-amyl_C2|PF07821.8|8.7e+03 R_Transcript_270462:3-1331(+)
GATGTTTATGGAGCAGTTATCGACGATAAAGTAGCTATGAAGATTGGACCTGGTCATTATGAACCGCCTATGACTTTGAATGCCAAGATTGCTGAGTTTGATGAATATTGGCTGAAGCGCCAAGAAGAAGCCAAGAAAGCCTTCCATGCAGCTTACAACCCTGACCCCCATAATGTCACTCATCACTTCAACCAACAAGTTCACCTGCACATGAAAGGACTAAATGTAAGGAGGAGCCTCCAAGGAAAGGTGAATTTCGGAGGTGGATGCAAGGCAACAAACCCTATGGACGCATGCTGGAGATGCCAACCAAACTGGGCGGAGGACAGAAAAAGGCTAACTGATTGTGTGATAGGGTTTGGTAAGGGAACCACGGGTGGCAAAGCAGGGAGATTCTACGTAGTCACGGACCCATCGGACAGTGACTTGGTGAACCCGAAACCTGGAACCCTACGTCATGCAGTGATCCAAGATGAGCCCTTATGGATCATCTTCGATCGCCCCATGAACATCAGGTTGAGCCAAGAGCTAATGGTGAATAGTGATAAGACCATTGATGCAAGGGGAGCTCAGGTCCACATTGCGCATGGAGCTGGTATTACTATCCAGTTTGTGAAGAATGTTATAATCCATGGTCTCCATATCCATGACATTTACCCTGGTAATGGTGGCATGATTAGGGACTCCACTACACATTATGGTTTCAGAACCAGAAGTGATGGTGATGCCATCTCTATTTTCGGATCTAGCAACATTTGGATTGATCATGTTTCTATGGCTAGAGGTACCGATGGCCTCGTTGATATCATTCAAGGTTCAACCGCCATCACCATCTCCAATTGCCACATGACTGACCACAATGAGGTTTTCCTCTTTGGAGCCACCAACGAGTATACAGAAGACACAAAAATGCAAGTCACAGTGGCATTCACCCACTTTGGTAAGGGCTTGGTTCAGAGGATGCCAAGGTGCCGATTTGGGTTCTTCCATGTAGTTAACAATGATTACACTCACTGGAGAATGTATGCCATTGGTGGTAGCCAACACCCCACCATCATCAGTCAAGGCAACCGATTCATCGCCCCTCATGATCTTAATGCCAAGGAGGTGACCAAGAGAGAAGCACCAGAATCAGAGTGGAAGTCATGGACATGGAGATCCGAAAACGATTTATTCATGAATGGAGCATATTTCAGGGCATCAGGATTCGGTAACCAAATCAGTGAAATCTCCAAGGCTGGTATGATACAAGCCATGCCAGGAACTATGGTGGGAGTTTTGACTCAATTTGCTGGACCAATCAAATGTATTCCTGGAAAGCCTTGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_270462.p1 GENE.R_Transcript_270462~~R_Transcript_270462.p1 ORF type:5prime_partial len:443 (+),score=64.68,Pec_lyase_C|PF00544.15|1.5e-18,Pec_lyase_N|PF04431.9|8.4e-19,Alpha-amyl_C2|PF07821.8|1.1e-05,Alpha-amyl_C2|PF07821.8|8.7e+03 R_Transcript_270462:3-1331(+)
DVYGAVIDDKVAMKIGPGHYEPPMTLNAKIAEFDEYWLKRQEEAKKAFHAAYNPDPHNVTHHFNQQVHLHMKGLNVRRSLQGKVNFGGGCKATNPMDACWRCQPNWAEDRKRLTDCVIGFGKGTTGGKAGRFYVVTDPSDSDLVNPKPGTLRHAVIQDEPLWIIFDRPMNIRLSQELMVNSDKTIDARGAQVHIAHGAGITIQFVKNVIIHGLHIHDIYPGNGGMIRDSTTHYGFRTRSDGDAISIFGSSNIWIDHVSMARGTDGLVDIIQGSTAITISNCHMTDHNEVFLFGATNEYTEDTKMQVTVAFTHFGKGLVQRMPRCRFGFFHVVNNDYTHWRMYAIGGSQHPTIISQGNRFIAPHDLNAKEVTKREAPESEWKSWTWRSENDLFMNGAYFRASGFGNQISEISKAGMIQAMPGTMVGVLTQFAGPIKCIPGKPC*

Click here to download the sequence:
Link to NCBI Protein BLAST