Transcript Information: R_Transcript_270471.p1


Annotated TAIR IDAT2G40820.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT3G56480.1); Has 203 Blast hits to 195 proteins in 64 species: Archae - 3; Bacteria - 13; Metazoa - 26; Fungi - 15; Plants - 101; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:17036768-17039474 | Reverse length=492
E-Value2.7E-51
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.179458024444
Replicate 21.5668880907685
Replicate 32.5641870443454
Condition 2: 8 Hour
Replicate 11.0963820125632
Replicate 22.3362115356463
Replicate 32.8446553957323
Condition 3: 24 Hour
Replicate 11.5419422764876
Replicate 20.65836593703216
Replicate 32.1234340367886


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_270471.p1 GENE.R_Transcript_270471~~R_Transcript_270471.p1 ORF type:internal len:134 (+),score=15.64,SCAB-IgPH|PF16709.1|1.1e-59 R_Transcript_270471:3-401(+)
ATTGAACATGCTCCTGGGTTGTCAAGCTTCGTCCAGACACTTATGCGGAAATCCAGCACTGACTTCACTGTAGTGATATCACAGATGAATGGGCATGATTATCCATCACGTTCTGCCCACATGTTTCATGTGGGGAAAACGAAAATGAAGCTGGGTAGAGGATGGATGAACAAGACTAGAGAGTCTTATTCGGCATCAATGCAGCTTTGTGGCGTAAGAGGAGGGGGCAACGCTGCTTCCAAATCATTATATTGGCAAGCACGGAAGGGAGTTTCCTACGTTTTGACATTTGAAACAGAAAGAGAGAGAAATGCTGCGATTATAATCGCAAGAAAATATGCTCTTGACTGCAATGTGAGGGTCTCTTCTTCGGCCACTCATCTTTCTCAATTTTTAACC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_270471.p1 GENE.R_Transcript_270471~~R_Transcript_270471.p1 ORF type:internal len:134 (+),score=15.64,SCAB-IgPH|PF16709.1|1.1e-59 R_Transcript_270471:3-401(+)
IEHAPGLSSFVQTLMRKSSTDFTVVISQMNGHDYPSRSAHMFHVGKTKMKLGRGWMNKTRESYSASMQLCGVRGGGNAASKSLYWQARKGVSYVLTFETERERNAAIIIARKYALDCNVRVSSSATHLSQFLT

Click here to download the sequence:
Link to NCBI Protein BLAST