Transcript Information: R_Transcript_27073.p1


Annotated TAIR IDAT2G44710.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:18432902-18436629 | Forward length=809
E-Value2E-60
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 131.478876925187
Replicate 228.499896302778
Replicate 328.890027525639
Condition 2: 8 Hour
Replicate 133.102748568024
Replicate 235.924039679282
Replicate 334.557492569086
Condition 3: 24 Hour
Replicate 141.474596008082
Replicate 232.444129471822
Replicate 339.780604256077


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_27073.p1 GENE.R_Transcript_27073~~R_Transcript_27073.p1 ORF type:5prime_partial len:915 (+),score=232.16,RRM_1|PF00076.18|4.1e-16,RRM_1|PF00076.18|2.5e-10,RRM_1|PF00076.18|1.2e-10,RRM_6|PF14259.2|1.5e-10,RRM_6|PF14259.2|1.7e-08,RRM_6|PF14259.2|1.7e-07,RRM_5|PF13893.2|0.0048,RRM_5|PF13893.2|4.8e-05,RRM_5|PF13893.2|5.3e-05,Nup35_RRM_2|PF14605.2|4.5e+03,Nup35_RRM_2|PF14605.2|0.0056,Nup35_RRM_2|PF14605.2|1.3e+02,Nup35_RRM_2|PF14605.2|0.6 R_Transcript_27073:2-2746(+)
AAAAAAACAAAAATAACGTCCATCGTTCTTCCTTTCTTCCGTCACCTGAGAAATAATAATACTATCACTTGCTCACCCCCATCGTCATCTTTTTCATTCGTCAGCTTTTCCTTCCCCAAAATCAAAATTCAATCTCACGCGCCACCGTCTGCGATGCCTCCCAAGACCTCCACGCGCACTAAACGCGCCCTCCGTTCCACCGCCCGTAAATCCGTCCCTTCCTCTCTCCCTACCTCCTTATCCTCACCTCATCCAAACGACGTCGCTTTACAAACCCTAACCGAAACCAATCAAAACGACGTCGTCGCTCAGAATGAATCTTCGCTTCTGCCGGCACCGGAAACCTCAACCGCTGTAGAAGAAGCTCCTGCGGCGAAGAACGACGTCGCTTCGGAGGCGGCACAGCCTCAATGCGAAACCGAAACCGAAACCCTAAAGGAGGAGAGTAAAGAGAATGGGAATGAGAATAGTAATAATAGTAATGAAAATAAGCAGAAGAAGATGGTGAAGAAGACTGTCAAGGTTGTCAAGAAGGTGGTGAAGAGAGTTCCTAAAAGGGTTTTGAAAGGGGAACCTGAAACTGATTGTGGTAATAGTAATAGAGCTGAGAACTTGGCAGCTAGTGATCAAGTGGAGGAGGGTTTGAAGGGGGGAACTGATCATAAAATTGGGAATTCGGATGTCAAGAAACCAAGTAACAGTGGTGATCAAATGAATGTGGAAAGTTTTAATACTACTAATTTGGATGATAAATCAGGGGGTAAGAAAGTGGAGGAGCAAATTAAGAAGATTGAATTTGATGAGAAAGAGAAAGAGAAAGGGAGTGAGTTGAAGGAAGTTGGTAATAGCGGTAAGGGGGTTGTGGAGGAGAGAGATGGGGAATGTAAGAAAGAAAACAGCGATAGAGATGGTCTTGAGAAGGAACAAGTTGATGAGAAAGAGAAAGAGAGCGAGTCGATGGAAGTCGATAACAGTGGCAAGGGGGTTGTGGAGGAGAGAGTTGGTGAATGTGGGAAGGGAAACGGCGAGAGAGATGGTGTTGAGAAGGAACAAGTTAAGAACATTGAAATTGATGAGAAAGAGAAGGAGAAAGGGAGTGAGTTGATGGAAGTGGATAATAGTGATAAAGGTGTAGTGGAGGAGAGAGACGGTGAATGTGGGATCAAAAACAATGTGAAAAATAGTGGTGAGAAGGAACAAGTTAAAAACATTGAAATTGATGAGAAAAAGAAAGGGTGTGAGTCGATGGAAGCTGATAATAGTGATAAGGGGGTTGTAGAGGAAAGAAGTGTTGAATGTGCGAACGAAAACAACGAGAAAAGCGGTGGTGAGAAGGAAGGGAAGGCGGAAGATGAGGGAGGAGAAGGGAAGCTATTTAGAGGGGAATTGGAGGCAATGGAGCGGAGGAAGAAGAGGAAGACGGAAATATTTATTGGGGGTTTGGATAAGGATGCCAAGGATGAAGATGTTAGGAAGGTGTTTGCCGAAGTGGGTGAGATATTGGAATTGACAGTCGTCATGAATGCTCAGACAGGCAAGAATAAGGGGTTTGCTTTCTTAAGGTATGCATCTGCAGCTGATGCCAAAAAGGCCTTGGAGAAGTTTGCCAATGTTGAGGTTTGTGGAAAGCAGTGTCATGCATTGCCTGTTGAAGGCAATGATACAATATTTCTTGGTAATATTGACAAGAAATGGAAGGAAGAGGATGTTGTCAAACTGTTGCAGGAGATTGGCATTGAAAAGATAGATAAGGTCACAGTTATGATTGATCCAAACAAAAGTGGATGCAATCGTGGGTTTGCCTTCGTTGAATTTGAAACCAACAAGGATGCTCAAATTGCTTACAAGAAGCTCCAAAAGAAAGGTGTTTTTGGGAAGAATCGAAACATAAAGGTTGCTTGGGCTGAACCCTTGAAGGAGCTTGATGAAGAAGAAATGCTTAAGGTCAAAACAGTTTATGCCGAGTTCATTCCTTCATCTTGGGATGAAGAGAAAGTGAGAGATACCTTTAAGAAATTCGGGGACATAGATGATATTGTTCTTGCCCGAAATCTACGAACTACTAAGAGAAAAGACTTCGCCTTTATCAGCTACAAAACCCGAGAAGCTGCTATTGAATGCATTGAATCATTCAGTGATGAGCTAAGAGATGAGGATGGGACCAAGGTAAATGTGAAGGTCTCCCTTGCCAAACCCATGCAAAAGGATAAAAAACAGAAATCGGCCGTGAAACCTGTTCCAAAGGAAGTCCCGAATAAGAAGCCAAAAACCAGCCACGTCCATACAGGTAACTTGAGGCCAATTGATCCTAGAATCAGGGCACAACCAACTGTGCCTCATTATACTCTTCAAATGGCCGAGAGATCATCGACAAATGCAGAGCTGGTACATTTATTGAGGGAACAAGCTTCATGGAGGCCATCACATGCACCCCTGAGCAATCGTTCGGATATACATTACTCGACCTCCTTACCTGGTCGGAAACGCCCATTTTCTATGCTGGAGGCTGATCCATTATATCCAGATCCAAGCAGATATCCTTACTCCCACTTGGAAGCCTCATTTCCTGTTGCAAGCTCAAGTCACAATGTTGTCCGTCCTAGTGGTCTCACAAGTTCCTTGGCTTATCACCAGCAGCATCGTGGACATCCTTCAGGATCGTTCCATGGAGCCAGAAATTATTTGAGCAACGCCGAGAATAGAGATCAAGCATATGGCAGCAATTTTCTATATCGTAGATATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_27073.p1 GENE.R_Transcript_27073~~R_Transcript_27073.p1 ORF type:5prime_partial len:915 (+),score=232.16,RRM_1|PF00076.18|4.1e-16,RRM_1|PF00076.18|2.5e-10,RRM_1|PF00076.18|1.2e-10,RRM_6|PF14259.2|1.5e-10,RRM_6|PF14259.2|1.7e-08,RRM_6|PF14259.2|1.7e-07,RRM_5|PF13893.2|0.0048,RRM_5|PF13893.2|4.8e-05,RRM_5|PF13893.2|5.3e-05,Nup35_RRM_2|PF14605.2|4.5e+03,Nup35_RRM_2|PF14605.2|0.0056,Nup35_RRM_2|PF14605.2|1.3e+02,Nup35_RRM_2|PF14605.2|0.6 R_Transcript_27073:2-2746(+)
KKTKITSIVLPFFRHLRNNNTITCSPPSSSFSFVSFSFPKIKIQSHAPPSAMPPKTSTRTKRALRSTARKSVPSSLPTSLSSPHPNDVALQTLTETNQNDVVAQNESSLLPAPETSTAVEEAPAAKNDVASEAAQPQCETETETLKEESKENGNENSNNSNENKQKKMVKKTVKVVKKVVKRVPKRVLKGEPETDCGNSNRAENLAASDQVEEGLKGGTDHKIGNSDVKKPSNSGDQMNVESFNTTNLDDKSGGKKVEEQIKKIEFDEKEKEKGSELKEVGNSGKGVVEERDGECKKENSDRDGLEKEQVDEKEKESESMEVDNSGKGVVEERVGECGKGNGERDGVEKEQVKNIEIDEKEKEKGSELMEVDNSDKGVVEERDGECGIKNNVKNSGEKEQVKNIEIDEKKKGCESMEADNSDKGVVEERSVECANENNEKSGGEKEGKAEDEGGEGKLFRGELEAMERRKKRKTEIFIGGLDKDAKDEDVRKVFAEVGEILELTVVMNAQTGKNKGFAFLRYASAADAKKALEKFANVEVCGKQCHALPVEGNDTIFLGNIDKKWKEEDVVKLLQEIGIEKIDKVTVMIDPNKSGCNRGFAFVEFETNKDAQIAYKKLQKKGVFGKNRNIKVAWAEPLKELDEEEMLKVKTVYAEFIPSSWDEEKVRDTFKKFGDIDDIVLARNLRTTKRKDFAFISYKTREAAIECIESFSDELRDEDGTKVNVKVSLAKPMQKDKKQKSAVKPVPKEVPNKKPKTSHVHTGNLRPIDPRIRAQPTVPHYTLQMAERSSTNAELVHLLREQASWRPSHAPLSNRSDIHYSTSLPGRKRPFSMLEADPLYPDPSRYPYSHLEASFPVASSSHNVVRPSGLTSSLAYHQQHRGHPSGSFHGARNYLSNAENRDQAYGSNFLYRRY*

Click here to download the sequence:
Link to NCBI Protein BLAST