Transcript Information: R_Transcript_270788.p1


Annotated TAIR IDAT2G45380.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, flower, cultured cell; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT4G34070.1); Has 171 Blast hits to 170 proteins in 31 species: Archae - 2; Bacteria - 0; Metazoa - 68; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:18699588-18703093 | Reverse length=494
E-Value3.4E-69
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.4358526969309
Replicate 27.4139478871109
Replicate 37.5708709004233
Condition 2: 8 Hour
Replicate 111.205395823316
Replicate 214.654589229252
Replicate 316.04930543554
Condition 3: 24 Hour
Replicate 119.261211148667
Replicate 211.775265339885
Replicate 313.169720616692


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_270788.p1 GENE.R_Transcript_270788~~R_Transcript_270788.p1 ORF type:5prime_partial len:354 (+),score=73.33,Mlf1IP|PF10248.5|3.4e-13 R_Transcript_270788:1-1062(+)
CTCTCTTATCTCATCCGTCTTCCCCCGAGACGTGTACATAAAAAGGAGTATTCCTCATTTTTTAAATTAACGACAACAAGGTATGCAGGAATTCTAGATCTTTCCTTCTCTTTCCGGAAGCATCTCTCATTGCTGTGCATTCCCGTCAACAATTTCAGGGTGACGATGAAAAACGAGAGAGAAAGCAGGGACGCACGGGACCCATTTGACATGTTTGGTGGAGTTGGAAAATTTGGAGGTTTTGGTGGCTCCATTTTTGGGAGGAATCCCTTTGATGATCCATTTTTCACAAATCCATTCAGCAGTATGTTTGACCAAAGAAATCTTATGCGTGATTCATTCCCAGTTATTCCACCAAGTGGACCTACTATTCGAGAACTGACTTCTGATGATGAGGATGACGGCAATGATCATGGAAGAAATGAAGAGGAAAATAAAGAGGGAAAGGGTCAGAAGGGTGCAACACATAAAAATCAGCCAATCATTGATCACCCAGATGATGAAACTGATGGTTCGGCAGGTGATAGTGAACATGTGAACTCCAGGACAGATTACAACAGGCCTCAGGGCACACAGGCTCAAACATTTAAAGTTCACAGTTGCAAAGTCACATATGGTGGTATCGATGGAGTGTATTACTCGTCTTCAGCAACAAGGAAGATGGGTAGTGATGGGGTGATCATGGAAGAGTGCAAAGAAGCTGATAAGGCAAAATGTGAAGCAACACATAGGATTTCAAGGGGACTTCATGATAAGGGTCATTCTTTGACAAGGAAGCTAAATCCAGATGGTAAAGTGGAGACAATGCAAACACTGCATAATCTGAATGAAGATGAAATTGGAAGTTTTGAAGAGGCCTGGAAAGGCAACACAGGAATCCATCTTCCACCTTCAACAGGAACACGCAGTGGTCCAGCCGATAAGATGTCGGACTGGGGAGGATCGCTTCTTCCATCCATCAGGCACATGGGAGATCCTTGGGGGAGGGTACCTAACAACGAAAGTAGGACTGATCCTTCAGGTGGCAGAACCAAAAAGGTCGTCAGAATCCCTATTGAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_270788.p1 GENE.R_Transcript_270788~~R_Transcript_270788.p1 ORF type:5prime_partial len:354 (+),score=73.33,Mlf1IP|PF10248.5|3.4e-13 R_Transcript_270788:1-1062(+)
LSYLIRLPPRRVHKKEYSSFFKLTTTRYAGILDLSFSFRKHLSLLCIPVNNFRVTMKNERESRDARDPFDMFGGVGKFGGFGGSIFGRNPFDDPFFTNPFSSMFDQRNLMRDSFPVIPPSGPTIRELTSDDEDDGNDHGRNEEENKEGKGQKGATHKNQPIIDHPDDETDGSAGDSEHVNSRTDYNRPQGTQAQTFKVHSCKVTYGGIDGVYYSSSATRKMGSDGVIMEECKEADKAKCEATHRISRGLHDKGHSLTRKLNPDGKVETMQTLHNLNEDEIGSFEEAWKGNTGIHLPPSTGTRSGPADKMSDWGGSLLPSIRHMGDPWGRVPNNESRTDPSGGRTKKVVRIPIE*

Click here to download the sequence:
Link to NCBI Protein BLAST