Transcript Information: R_Transcript_27081.p1


Annotated TAIR IDAT5G16280.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:5323377-5331345 | Reverse length=1272
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.64720605543
Replicate 28.5582746262084
Replicate 311.115458849065
Condition 2: 8 Hour
Replicate 110.455920590827
Replicate 211.979043843492
Replicate 314.247886907773
Condition 3: 24 Hour
Replicate 114.22385882586
Replicate 212.979725340883
Replicate 313.339944238521


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_27081.p1 GENE.R_Transcript_27081~~R_Transcript_27081.p1 ORF type:complete len:1288 (+),score=259.76,TRAPPC-Trs85|PF12739.3|1.3e-87,TRAPPC9-Trs120|PF08626.7|1.3e+03,TRAPPC9-Trs120|PF08626.7|1.2e-05 R_Transcript_27081:295-4158(+)
ATGGTGGATCCGGCAAATACGACGCTAGGGAAGATGTTGATGAAGGAGATAACGCCAGTAGTGATGGTGCTATGTACACCACTCGTTGAACAAGCTTGTAAGAAGAATGGCCTCAACTTCGTTGACATGCTCTCTCCTTTCTCCGTCTTTGATAACATTGACGTACCTGTACGGACCGCAAGTGATCAGCCTTATAGGCTTCAAAAGTTCAAATTAAGATTGTTCTATGCTTCTGATATTCGGAAGCCTGAATTTGAGGCAGCAAGAGCTCGGCTGAACAACGTGGTTACTGGAACTGCGGACAAGGAAAATTCGGACAATTGTTTGGAGCTCCATGACAATGAAAATATTTCCGCGATTTCGAAGTCAGAATTATTACCATCATGGTTCCAGATCTTCAATGAAGAGCTTATATGTGCCTCATCATTTTCTGACCATGAAGCTTTTGACCATCCAGTGGGTTGTCTTTTGGCTGTTTCGTCAAAGGATGAAGAGCCAATCAATAAATTAGTTGACCTTTTCAACACAAACAAACTTCCCTCTCTTCTGAATGATGGTGTCATGGATCCAAAGATTTTGAAACACTATGTGGTGTTGCATGATAATCAAGATGGTCCTGCAGAGGAAGCATCAAAGATTTTATCGGAGATGAAAAACACATATGGCATAAATGATTGTCAATTGCTCTGCATCAACTCGCTGCAAGATGGATCAGAGGGAAGTCAAGTTAACCCATGGACATCTGCTAAATTAGATGCTCAAGGAGAGGAACATCTTGGCTGCTTCCTGAATACTGATGACATCGATGAGATAAAGATTCTCATGCAAGATTTAACAACTAAACATGTAATTCCTCACATGGAACAAAAAATACGGATGCTAAATCAGCAGGTGTCTGCTACAAGGAAAGGTTTCAGGAACCAAATAAAAAATCTATGGTGGAGAAAGGGGAAGGAAGATGCACCAGATACTCCGGATGGTCCAGCGTATACTTTTAGCTCAACAGAATCACAAATCAGAGTTTTGGGTGACTATGCCTTCATGCTACGGGACTATGAGCTTGCATTATCAAACTACCGACTTATTTCCACAGACTATAAGCTTGATAAAGCATGGAAACGTTATGCTGGTGTACAGGAAATGATGGCTCTGACGTACTTCATGTTGGACCAGTCAAGAAAGGAAGCAGAGTACTGCATGGAAAGTGCATTCACTACATATATAAAACTTGGTTCAAGAGGTCGGCAAAATGCCATTCGTTGTGGGCTTTGGTGGGTTGAAATGCTAAAAGCGAGGGAACAGTATAAGGAGGCGGCCAGTGTTTACTTCCGTGTTTCTGGTGAGGAACCACTGCAGTCTGCAGTAATGCTTGAGCAAGCATCTTATTGTTACTTATTCTCAGTGCCACCAATGTTACGCAAGTATGGATTTCATCTCATTCTCTCAGGCGATTCCTATAAAAAATCTGATCAGATGAAGCATGCTATTCGGACATATAAGACTGCTCTTTCGGTATTCAAGGGGACTTCATGGGGGCTTATTAGAGATCATATACATTTTCAGCTTGGCAAGTGGTTTGCATTCCTTGGAATGTTTGATGTGGCAATTGAGCATATGCTGGAAATTCTAGCCTGTACTCATCAAACCAAGGCAGCGCAGGAGTTATTCCTTGGAGATTTTCTCCAACTTGTTCAGAAAACAGGGAAAACATTTGAGGTTTGCAGACTTCGTTTGCCTGTTGTCAAGCTTCCTTCTCTCAGAGTTGTTTTCGAAGACCATCGAACGTATGCGTCACCTGCTGCTGTTGCTGTAAGAGAGAGCGTTTGGAGGTCTCTGGAGGAAGAAATGATCCCGTCATTGTCAACTGCCAAGAGTAATTGGTTGGAATTACATACGAAGCTTGTGGCAAAGAAGTATAAAGAATCAAACGTTTGTGTAGCTGGGGAAGCAGTAAAGGTTGACATTGGATTCAAAAACCCACTTCAAATCCCAATTGCGGTCTCTAATGTTTCTCTGATATGTAAGCACTACACAAGGAGTGAAGAAATGGAAGAAGATGAAATTGGGTCTTCTACCAATTTACAAAACGATGAGCAGTTGAGGAAATTAATTGCTGGAAGTGAAGTAAAAGCAAATGATTCTCCGTTTACATCGTCTGAAGTTGACTTTTCTCTCAATGGTTGCGAGACCCTTGTGGTACAGTTAGCTGTTACTCCTAGTGTGGAAGGGATGCTGAAATTAGTTGGGGTTAGATGGAAACTGTCAGGTTCTGTGGTTGGCTTTCAGGTTTTTGACTCTGAGCAACTGAAGAAAAAGGTTGCAAAAAGGAGAAAATCCAAGCAATCTTATGGAAATGACCTCAAGTTCTTGGTTATAAAGTCTCTGCCAAGGCTTGAAGGTTCCATCCGTCACCTCCCCAAAAAATCTTATCTTGGAGAAATGCATCGTCTTGTTTTGGAGTTGAAAAACAGATCAGACTTTCCTGTGAAGAATTTGAAAATGAAGATCAGTCATCCAAGATTTGTCACTACCAGGAGTTGGGAAGCTTTGGATCTAGAATTTCCTACTTGCCTCCGGAAGGAGAATTTTGAGGAACATGTTGCTGCAGTTAGCTGTGATCAAACCCTGTCTTATTTCCAATTTCCGGAGGATCTGGTTATTCAAGGAGAAGAGCCAGTTTTGTGGCCTCTATGGTTCAGAGCTGCTCTTCCTGGAGCAATCTCTTTGTACACGACACTTTATTATGAAGTGGGAGATGTATCAGGCATCATACGATATCGTACTCTTCGTATTTGTCAAAATTTTGAGGTCATGCCATCATTGGATGTATCGTTTCAAATACGCCGCTGCCCATCAAAATTGCGGGAATTCCTTGTACACATGGATCTTGTGAATAAAACTAGTTCGCAAAGTTTCGAGGTTCAGCAATTGTCTTGTTTAGGATATCAGTGGGACATCACAATGCTTCAGCCTGTCAACATCCCATCACCTATAATGGCAGGGCAAGCATTATCCTGCTTTTTCAAGCTTCAGAATGTCAGCAGAACTGCTTCTTCCGAGGATCAGGTTATTTCTCATATTGATAGGAGAGGAAGTCATGTAAGATTAGGCGGTCAGGTTGGCAATAAAGATTTGCTCCATATATCTCACTCACCTATGGTTGATTTCCATCATCATGAAAGATTGCAGGAAGGGACTTCTGAACAGAGTCATTCTGAAACTGTGGACTTTATCTTAATTTCTCATCCACGTGATTATGATAGCACGGAGTCTGCAGATCACTCTTGCCTTTTCTCTCATTATGCATGTAATTGCAGTGTTGCTAGTAGCGGCCCCCTTTCTTGGCTGATGGATGGGCGCCGAACTATTCACCATGACTTTTCAACTTCTTTCTGTGAAGTAAATCTGAGTATGAGGATCCATAACTCTCTAGATTCTACTGTATCTGTGCGCATTGACACACATAATTCTGGTCCGAGCTCCAGCCAATCAACTCATTCAAGTGGAGTCAGTTCTGAAAATCAAGCTGGATGGCATGATGTCTCTTTGGCTAATGACATTAAGATCACCTCAGACACCCTTGGAAGCACTCGATCAGCACAGCAAACCCAACTAGAGAGTGTCTCACCATTCATGTGGTCTGGATCAAGCTGTACCAAAGTCGAGCTGTTGCCAGTGTCCACAATGGAGGTTCCTCTCCAGATTTGTGTATTTACCCCAGGCATTTATGATATATCTAATTATTACTTGCACTGGGAGGTGGTGCAATCAGATGGTGGAATTCTTGATGCTGGAGACTCAAGACCGTCTTCTGGGACATATCCAGGACAATCCTTTTACCTTACTGTCCTGCAGTCTACATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_27081.p1 GENE.R_Transcript_27081~~R_Transcript_27081.p1 ORF type:complete len:1288 (+),score=259.76,TRAPPC-Trs85|PF12739.3|1.3e-87,TRAPPC9-Trs120|PF08626.7|1.3e+03,TRAPPC9-Trs120|PF08626.7|1.2e-05 R_Transcript_27081:295-4158(+)
MVDPANTTLGKMLMKEITPVVMVLCTPLVEQACKKNGLNFVDMLSPFSVFDNIDVPVRTASDQPYRLQKFKLRLFYASDIRKPEFEAARARLNNVVTGTADKENSDNCLELHDNENISAISKSELLPSWFQIFNEELICASSFSDHEAFDHPVGCLLAVSSKDEEPINKLVDLFNTNKLPSLLNDGVMDPKILKHYVVLHDNQDGPAEEASKILSEMKNTYGINDCQLLCINSLQDGSEGSQVNPWTSAKLDAQGEEHLGCFLNTDDIDEIKILMQDLTTKHVIPHMEQKIRMLNQQVSATRKGFRNQIKNLWWRKGKEDAPDTPDGPAYTFSSTESQIRVLGDYAFMLRDYELALSNYRLISTDYKLDKAWKRYAGVQEMMALTYFMLDQSRKEAEYCMESAFTTYIKLGSRGRQNAIRCGLWWVEMLKAREQYKEAASVYFRVSGEEPLQSAVMLEQASYCYLFSVPPMLRKYGFHLILSGDSYKKSDQMKHAIRTYKTALSVFKGTSWGLIRDHIHFQLGKWFAFLGMFDVAIEHMLEILACTHQTKAAQELFLGDFLQLVQKTGKTFEVCRLRLPVVKLPSLRVVFEDHRTYASPAAVAVRESVWRSLEEEMIPSLSTAKSNWLELHTKLVAKKYKESNVCVAGEAVKVDIGFKNPLQIPIAVSNVSLICKHYTRSEEMEEDEIGSSTNLQNDEQLRKLIAGSEVKANDSPFTSSEVDFSLNGCETLVVQLAVTPSVEGMLKLVGVRWKLSGSVVGFQVFDSEQLKKKVAKRRKSKQSYGNDLKFLVIKSLPRLEGSIRHLPKKSYLGEMHRLVLELKNRSDFPVKNLKMKISHPRFVTTRSWEALDLEFPTCLRKENFEEHVAAVSCDQTLSYFQFPEDLVIQGEEPVLWPLWFRAALPGAISLYTTLYYEVGDVSGIIRYRTLRICQNFEVMPSLDVSFQIRRCPSKLREFLVHMDLVNKTSSQSFEVQQLSCLGYQWDITMLQPVNIPSPIMAGQALSCFFKLQNVSRTASSEDQVISHIDRRGSHVRLGGQVGNKDLLHISHSPMVDFHHHERLQEGTSEQSHSETVDFILISHPRDYDSTESADHSCLFSHYACNCSVASSGPLSWLMDGRRTIHHDFSTSFCEVNLSMRIHNSLDSTVSVRIDTHNSGPSSSQSTHSSGVSSENQAGWHDVSLANDIKITSDTLGSTRSAQQTQLESVSPFMWSGSSCTKVELLPVSTMEVPLQICVFTPGIYDISNYYLHWEVVQSDGGILDAGDSRPSSGTYPGQSFYLTVLQST*

Click here to download the sequence:
Link to NCBI Protein BLAST