Transcript Information: R_Transcript_27088.p1


Annotated TAIR IDAT2G40800.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56430.1); Has 43 Blast hits to 43 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:17024653-17026769 | Reverse length=377
E-Value7.4E-127
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 127.158995043736
Replicate 229.567253967879
Replicate 327.665142024339
Condition 2: 8 Hour
Replicate 126.023624581613
Replicate 227.870084613652
Replicate 328.937350264385
Condition 3: 24 Hour
Replicate 134.159442638323
Replicate 236.59894410103
Replicate 332.038524251835


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_27088.p1 GENE.R_Transcript_27088~~R_Transcript_27088.p1 ORF type:5prime_partial len:414 (+),score=70.14 R_Transcript_27088:2-1243(+)
CTTTCAAAGCTGAAAATCCGAATTTTCTGGTTGTTGTTCTTCTATTATCAGGCTTTGATCAAAATGTCAAAACCCCCAAAAAGGATCATTCAAAGTTTTCTTAGATTCCACTCCAATGGCAAAATTACAAACCATATTGCTTCAACCCCAAAACCCTCATTTTATAATGCACATAGGTTTTCCACTAATTCCTCAAATGGGTTCTCAATTTCAGCTCTAAAACCCCCCTATCCCCAGCAATTTTCAAGACCCATTTCCTCAAATGGTGTTCTGTGGCCTAAGTTTAGGTCTTTTAGGTCATATTTTGAGGGTTCATGCAGGAATCTTAAGCTTAGTGATGGTTCTTCAAAGAATTTGGGTTTGGATTTTGATCCTTTGAGGATTAGGAGCTTCTCTACCAGGGTGTCAAATGTTGGTAAGAAAGTGGGTGGTACTAATATGAATGGTAATTTGGCTAAGAAAGTGGTGGAGAAGCCATTGTCTGTTGTTAGCTCGACGTTTTCGCGGTATAAGGATGTAATAGGGCTGCAAATTGAGGGGTTTTGGAAGAGGAACTATTTGTTGTTGGTTGGAGCAGCTGGTGTGATTGTGTGTTACACTTTGTGGAAAATTATGTATGGAATTGCCAACACTTTTATCGGGTTTTCTGAAGGGCTCGCGCGATACGAATTCCTTGCTCTTTCAGCTGCAATGGTTGCCTTATTTGGCCTCTATCTCCGTTCAAGATATACAATCAACCCAGATAAAGTTTATAGGATGGCCATGACAGAGCTCAATACATCTGCAAAAATTCTTGAGGTTATGGGCACTCCTCTGATAGGAACTGACTTGAGAGCATATGTGATGTCAGGAGGCGGGCTTACAATGACCAAATTGAAACCAAGACTCAGGAGTAAGCGATGTTTCCTTATCTTCCCCATACGAGGATCTGAGAGGAGAGGCCTAGTGAGTGTTGGAGTCAAGAAGAGTAAGGGCAAGTACAATATGAAGTTACTAGCAGTGGACGTTCCCCAAGCACCAGGTCAGCCCTTTTTTGTCGTTGGAAATGAAGAAGATTACAAAGTGGGTGGAGGACTAATAGCCGAGCTAAGAGATCCTGTAATTAGAGCAATGGCCGCAAGCAAGGAGTTTGAAGAGATTGATGACATCGAGGCAGAGGAGGAAGAACAACAGGAGCTACAGGATGCAGAAAGGAAACACCAAGAGGAGATAGCCAAACTCGAGAGAAATAGAACACAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_27088.p1 GENE.R_Transcript_27088~~R_Transcript_27088.p1 ORF type:5prime_partial len:414 (+),score=70.14 R_Transcript_27088:2-1243(+)
LSKLKIRIFWLLFFYYQALIKMSKPPKRIIQSFLRFHSNGKITNHIASTPKPSFYNAHRFSTNSSNGFSISALKPPYPQQFSRPISSNGVLWPKFRSFRSYFEGSCRNLKLSDGSSKNLGLDFDPLRIRSFSTRVSNVGKKVGGTNMNGNLAKKVVEKPLSVVSSTFSRYKDVIGLQIEGFWKRNYLLLVGAAGVIVCYTLWKIMYGIANTFIGFSEGLARYEFLALSAAMVALFGLYLRSRYTINPDKVYRMAMTELNTSAKILEVMGTPLIGTDLRAYVMSGGGLTMTKLKPRLRSKRCFLIFPIRGSERRGLVSVGVKKSKGKYNMKLLAVDVPQAPGQPFFVVGNEEDYKVGGGLIAELRDPVIRAMAASKEFEEIDDIEAEEEEQQELQDAERKHQEEIAKLERNRTQ*

Click here to download the sequence:
Link to NCBI Protein BLAST