Transcript Information: R_Transcript_271046.p1


Annotated TAIR IDAT3G07880.1
Annotated Gene NameImmunoglobulin E-set superfamily protein
Annotated Gene Symbol(s)SCN1
Annotation TypeHomolog
Chromosome Positionchr3:2514175-2515544 | Forward length=240
E-Value3E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.1176526041268
Replicate 22.7471794937212
Replicate 35.137959834651
Condition 2: 8 Hour
Replicate 18.0093950762017
Replicate 27.9412477566827
Replicate 312.044526673341
Condition 3: 24 Hour
Replicate 19.2260346802923
Replicate 210.100071828395
Replicate 310.432457374129


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_271046.p1 GENE.R_Transcript_271046~~R_Transcript_271046.p1 ORF type:internal len:107 (-),score=21.24,Rho_GDI|PF02115.13|4.4e-18 R_Transcript_271046:2-319(-)
ACTGATTTTTTTTCTCCTTTCTTCTTGTGTTTCTCTTCGGTAAAGGATTCTGTAATGAATGATGATGAAAGCTTAACCAATTGCAAGCAGCAAGAAGTTCCTGCAAGTATCGACACATCCGCTGTCAGAGAAAACAAAGGACCAGAGGTGAAGATATTGAGCCTCACAGTTGTTTCGCCTGGCCGTCAAGATGTTGTGTTGCCAATTCCATTTCCTGCAACTACTTCCAAGTCCACACTGTTTACCCTCAAGGAAGGAAGCAAATACCGAATCAAGTTTCATTTCACCGTGTCTAACAACACTGTTTCTGACCTCAAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_271046.p1 GENE.R_Transcript_271046~~R_Transcript_271046.p1 ORF type:internal len:107 (-),score=21.24,Rho_GDI|PF02115.13|4.4e-18 R_Transcript_271046:2-319(-)
TDFFSPFFLCFSSVKDSVMNDDESLTNCKQQEVPASIDTSAVRENKGPEVKILSLTVVSPGRQDVVLPIPFPATTSKSTLFTLKEGSKYRIKFHFTVSNNTVSDLK

Click here to download the sequence:
Link to NCBI Protein BLAST