Transcript Information: R_Transcript_27130.p1


Annotated TAIR IDAT2G25940.1
Annotated Gene Namealpha-vacuolar processing enzyme
Annotated Gene Symbol(s)ALPHA-VPE, ALPHAVPE
Annotation TypeOrtholog
Chromosome Positionchr2:11063496-11066020 | Reverse length=478
E-Value8.7E-73
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.027830576809
Replicate 24.9574598205148
Replicate 36.2039080989579
Condition 2: 8 Hour
Replicate 113.433217575225
Replicate 214.130835052416
Replicate 320.546614799466
Condition 3: 24 Hour
Replicate 116.421209336483
Replicate 27.1985914434523
Replicate 315.807786718315


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_27130.p1 GENE.R_Transcript_27130~~R_Transcript_27130.p1 ORF type:internal len:144 (+),score=17.37,Peptidase_C13|PF01650.14|6.9e-53 R_Transcript_27130:1-429(+)
ACAGGAAATAAGGTGACTACACATAATCTTTTATCAGTCATACTTGGGGACAAGACAAATATTACAGGAGGTAGTGGCAAAGTGGTAAAAAGTGGTCCAAATGATCGTATTTTTATTTATTATGCTGATCATGGAAGCCCCGGAGTGCTTACAATGCCCAGCGGAGGTGATCTTTATGCCAAAGACTTGATTAACACCTTGAGAAAAAAGCATGCTTCGGGGACCTATAAAAGCATGGTGATATATATTGAAGCATGTGAGGCAGGGAGTATATTCCAAGGTCTATTACCAAAAGATTGGAATATATATGTAACAACAGCATCAAATCCTAGTGAAAGCAGTTGGGCAACCTATTGTCCTGGTTCAAGCCAGGGTCCTTCTCCACCTAGCGAATATGATACTTGCTTGGGTGACTTGTATAGTGTTGCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_27130.p1 GENE.R_Transcript_27130~~R_Transcript_27130.p1 ORF type:internal len:144 (+),score=17.37,Peptidase_C13|PF01650.14|6.9e-53 R_Transcript_27130:1-429(+)
TGNKVTTHNLLSVILGDKTNITGGSGKVVKSGPNDRIFIYYADHGSPGVLTMPSGGDLYAKDLINTLRKKHASGTYKSMVIYIEACEAGSIFQGLLPKDWNIYVTTASNPSESSWATYCPGSSQGPSPPSEYDTCLGDLYSVA

Click here to download the sequence:
Link to NCBI Protein BLAST