Transcript Information: R_Transcript_271515.p1


Annotated TAIR IDAT3G10920.1
Annotated Gene Namemanganese superoxide dismutase 1
Annotated Gene Symbol(s)MSD1, MEE33, ATMSD1
Annotation TypeOrtholog
Chromosome Positionchr3:3418015-3419581 | Forward length=231
E-Value1.7E-139
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1263.14685376386
Replicate 2272.68945165667
Replicate 3285.761551512
Condition 2: 8 Hour
Replicate 1240.67564754396
Replicate 2254.35503094349
Replicate 3271.51784219662
Condition 3: 24 Hour
Replicate 1264.0147831186
Replicate 2252.90030194529
Replicate 3253.35018175084


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_271515.p1 GENE.R_Transcript_271515~~R_Transcript_271515.p1 ORF type:complete len:240 (+),score=42.80,Sod_Fe_C|PF02777.14|6.2e+03,Sod_Fe_C|PF02777.14|2.3e-35,Sod_Fe_N|PF00081.18|6.3e-35 R_Transcript_271515:171-890(+)
ATGGCACTTGGAACTCTAATGGCGAGAAAAACCCTAGCAGCTTCAGCAACTACAGCCACAAAAGCAGGAGTTCTAGGGTTCATCCAATCGAAGAGGTCATTACAGACCTTCACTCTCCCCGACCTTCCGTACGACTATGGCGCTCTTGAGCCCGCCATTAGCGGCGAAATCATGCAGCTCCATCACCAGAAGCATCACCAGACTTACATCACTAATTACAACAAGGCTCTCGAGCAACTTGAAGGTGCTATGAACAAAGGCGATGCTTCTACGGTCGTTAAGCTCCAGAGCGCCATCAAGTTCAATGGTGGAGGTCATGTCAATCACTCAATTTTCTGGAAGAATCTTGCTCCAATTCAGGAAGGCGGTGGTGAGCCTCCAAAGAGTTCACTGGGTTGGGCTATTGATTCCAACTTTGGTTCTTTGGAAGCCCTTATCCAGAAGATGAATGCAGAAGGTGCTGCCGTACAAGGCTCGGGATGGGTGTGGTTAGGAGTTGACAAGGAGATGAAAAAGCTTGTGGTTGAAACTACTGCAAATCAGGACCCACTGGTGACTAAAGGTGCAAGTTTGGTTCCTTTGCTTGGTATAGATGTGTGGGAGCATGCATACTACCTGCAGTACAAGAACGTCAGACCAGATTACCTGAAGAACATTTGGAAGGTTATGAATTGGAAATATGCCAGCGAGGTTTACGAAAAAGAATGCCCTACCCACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_271515.p1 GENE.R_Transcript_271515~~R_Transcript_271515.p1 ORF type:complete len:240 (+),score=42.80,Sod_Fe_C|PF02777.14|6.2e+03,Sod_Fe_C|PF02777.14|2.3e-35,Sod_Fe_N|PF00081.18|6.3e-35 R_Transcript_271515:171-890(+)
MALGTLMARKTLAASATTATKAGVLGFIQSKRSLQTFTLPDLPYDYGALEPAISGEIMQLHHQKHHQTYITNYNKALEQLEGAMNKGDASTVVKLQSAIKFNGGGHVNHSIFWKNLAPIQEGGGEPPKSSLGWAIDSNFGSLEALIQKMNAEGAAVQGSGWVWLGVDKEMKKLVVETTANQDPLVTKGASLVPLLGIDVWEHAYYLQYKNVRPDYLKNIWKVMNWKYASEVYEKECPTH*

Click here to download the sequence:
Link to NCBI Protein BLAST