Transcript Information: R_Transcript_27225.p1


Annotated TAIR IDAT2G34840.1
Annotated Gene NameCoatomer epsilon subunit
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:14702603-14704165 | Forward length=293
E-Value4E-163
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1291.92105720661
Replicate 2347.63770758473
Replicate 3348.27752594289
Condition 2: 8 Hour
Replicate 1244.94337564874
Replicate 2274.59781887324
Replicate 3274.15840954321
Condition 3: 24 Hour
Replicate 1292.09639161338
Replicate 2305.79730925448
Replicate 3259.6230161477


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_27225.p1 GENE.R_Transcript_27225~~R_Transcript_27225.p1 ORF type:complete len:289 (+),score=60.17,Coatomer_E|PF04733.10|2.4e-128,TPR_12|PF13424.2|1.4e+04,TPR_12|PF13424.2|2.6e+03,TPR_12|PF13424.2|69,TPR_12|PF13424.2|2.6e+02,TPR_12|PF13424.2|5.7e-05,TPR_12|PF13424.2|0.00018,TPR_12|PF13424.2|6e+02,TPR_16|PF13432.2|67,TPR_16|PF13432.2|0.0001,TPR_16|PF13432.2|0.03,TPR_16|PF13432.2|2.2e+03,TPR_2|PF07719.13|3.8e+03,TPR_2|PF07719.13|1.1e+04,TPR_2|PF07719.13|14,TPR_2|PF07719.13|0.0031,TPR_2|PF07719.13|2e+02,TPR_19|PF14559.2|4.1e+03,TPR_19|PF14559.2|87,TPR_19|PF14559.2|3e-05,TPR_1|PF00515.24|1.5e+03,TPR_1|PF00515.24|30,TPR_1|PF00515.24|1.5e+03,TPR_1|PF00515.24|0.0048,TPR_1|PF00515.24|79 R_Transcript_27225:654-1520(+)
ATGGCGACTCCAGATCTTCTATTCAATCTGCGCAACAACTTCTACTTGGGAGCTTACCAAGCAGCCATTAACAACAGCGACATACCCAATCTCTCCCCTGAAGAAGCTATTGAACGAGATTGCCTCGTGTACAGATCCTACATTGCTCTCGGCAGCCACCAGCTTGTGATCAATGAAATCGATTCATCTGCTGCCACGCCTCTTCAAGCGGTGAATTTGCTGGCTCTTTACCTTTCGGGCTCCGATAAGGAATCAGCAATTTCCAGTTTGAAGGAGTTGTTGGCAGACCTTGCTATTGCAAACCTGCCAACTTTGCGGCTTGTTGCTGGTATCATATTCATGCATGAACAAGACTACACAGAAGCTTTGAAACATACTAACGCTGGAGGAACCATGGAACTGCATGCATTGAATGTCCAAATATACCTCAAGATGTACAGATCAGATCACGCAGAGAAACAGCTAAAGATTATGCAACAAGTTGACGAGGATCACACATTAACACAACTCGCAAATGCTTGGCTGAATTTGGCAGTGGGTGGTTCCAAGATACAAGAAGCGTATCTCATCTATCAGGATTTCTCTGAGAAGTATCCAATGACTGGATTGATTCTGAATGGGAAAGCTGTTTGTTGCATGCATATGGGAAACTTTGATGAAGCAGAATCATTGTTACTTGAAGCACTGAATAAGGATGCTAAAGATGCTGAAACCCTGTCGAATTTGGTTGTGTGCTGTCTTCATCTTAATAAACAAGCTACTCGTTACCTGAGCCAGTTGAAGGTTACTCATCCGGAGCACATGTTTGTGAAGCGTTTATCTGCTGCAGAAGAGAGTTTCGAAAGAGCAGTACAATCTGTTGCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_27225.p1 GENE.R_Transcript_27225~~R_Transcript_27225.p1 ORF type:complete len:289 (+),score=60.17,Coatomer_E|PF04733.10|2.4e-128,TPR_12|PF13424.2|1.4e+04,TPR_12|PF13424.2|2.6e+03,TPR_12|PF13424.2|69,TPR_12|PF13424.2|2.6e+02,TPR_12|PF13424.2|5.7e-05,TPR_12|PF13424.2|0.00018,TPR_12|PF13424.2|6e+02,TPR_16|PF13432.2|67,TPR_16|PF13432.2|0.0001,TPR_16|PF13432.2|0.03,TPR_16|PF13432.2|2.2e+03,TPR_2|PF07719.13|3.8e+03,TPR_2|PF07719.13|1.1e+04,TPR_2|PF07719.13|14,TPR_2|PF07719.13|0.0031,TPR_2|PF07719.13|2e+02,TPR_19|PF14559.2|4.1e+03,TPR_19|PF14559.2|87,TPR_19|PF14559.2|3e-05,TPR_1|PF00515.24|1.5e+03,TPR_1|PF00515.24|30,TPR_1|PF00515.24|1.5e+03,TPR_1|PF00515.24|0.0048,TPR_1|PF00515.24|79 R_Transcript_27225:654-1520(+)
MATPDLLFNLRNNFYLGAYQAAINNSDIPNLSPEEAIERDCLVYRSYIALGSHQLVINEIDSSAATPLQAVNLLALYLSGSDKESAISSLKELLADLAIANLPTLRLVAGIIFMHEQDYTEALKHTNAGGTMELHALNVQIYLKMYRSDHAEKQLKIMQQVDEDHTLTQLANAWLNLAVGGSKIQEAYLIYQDFSEKYPMTGLILNGKAVCCMHMGNFDEAESLLLEALNKDAKDAETLSNLVVCCLHLNKQATRYLSQLKVTHPEHMFVKRLSAAEESFERAVQSVA*

Click here to download the sequence:
Link to NCBI Protein BLAST