Transcript Information: R_Transcript_27233.p1


Annotated TAIR IDAT2G44710.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:18432902-18436629 | Forward length=809
E-Value3E-83
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 132.932818703679
Replicate 215.69770573577
Replicate 324.311396033652
Condition 2: 8 Hour
Replicate 129.048089784114
Replicate 227.001819581809
Replicate 344.651249710056
Condition 3: 24 Hour
Replicate 142.558576606074
Replicate 227.048902412972
Replicate 339.129434322331


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_27233.p1 GENE.R_Transcript_27233~~R_Transcript_27233.p1 ORF type:5prime_partial len:424 (+),score=140.38,RRM_1|PF00076.18|1.1e-18,RRM_1|PF00076.18|6.6e-08,RRM_1|PF00076.18|2.2e-14,RRM_6|PF14259.2|2.2e-11,RRM_6|PF14259.2|0.00054,RRM_6|PF14259.2|9.2e-09,RRM_5|PF13893.2|2.1e-06,RRM_5|PF13893.2|0.053,RRM_5|PF13893.2|0.0014,Nup35_RRM_2|PF14605.2|0.11,Nup35_RRM_2|PF14605.2|0.0073,RRM_7|PF16367.1|0.094,RRM_7|PF16367.1|8.5e+02,RRM_7|PF16367.1|0.044 R_Transcript_27233:2-1273(+)
CAGAACCCAGAGGATGTGAAAGATGATCAGAAACCAGAGGTTGTGAAAGATGATCAGAACCCAGAGAATGTAAAAGATGATCAGAACCCAGAGGATGTGAAAGGCGAACAGAAAGCAGAGAATGTGGATGATAAACCTGTGGGCAAGGTGGAAGAAGAAGGTGCTCAAGCAAAGGATGGGCCTCCTGCTGAGGCAATGGAGGACTATGGGGAAGAAGAGGGTTTTGTTGAACCTGGGGAGGAGGACCTCCAAGAGGATGATGAGCCTGAGTCTGTCGATGATTATAAGGCCTCTGATGAAGAGCACAAGGAATTAGCAGCTGCTGCCAAGGAGCGAAAGATTAAGAAGGAACTTGAAATATTTGTGGGTGGATTAGACCGTGAAGTTGTGGAAGATGATGTTAAGAAGGCTTTTGATAAGATTGGAGAGGTGCTTGAAGTGAGGTTGCTGAAAGATCCTTCAACAAACAAGAACAGGGGTTTTGCATTTGTAAGGTTTGCAACTAAAGAGCAGGCAAAGCGGGCCTTATCAGAAATGAAAAATCCTGTTATACGTGGGAAGCGATGTGGGGCTGCACCTAACGAGGACAACGACACTCTCTTCATTGGAAACATTTGTAATACATGGACAAAAGAAGCGATAAAACAGAAGCTCAAGGATTACAATGTTGAAGGTGTTGAGAACATTACTCTTGTTCAAGACCCTCGTCACGAGGGTTTAAGTCGTGGGTTTTGCTTCATTCAATTTGCTTGTCATGCTGATGCGATGTTTGCGTACAAGAGGCTTCAAAAGCCAGATGCAATATTTGGTCATACTGAGAGGACAGCAAAGGTTGCTTTTGCTGAGCCTCTACAAGAGCCAGATCCTGCGGTCATGGCCAAGGTTAAATCAGTTTTTGTAGATGGACTCCCTCCTCACTGGGATGAAGATCGTGTTAGGAAGCATTTCAAAAATTATGGGGAGATTGAACGTATTACTCTAGCTCGTAATATGTCTTCAGCAAAGCGAAAAGATTTTGGTTTTGTTGATTTCACTACACATGAGGCTGCAATTACTTGCATTGATGACTTAAAGAGTAAGGAGTTGGTCGATGGAAATGTGAAGACAAAAGTGAAAGCAAGGCTTTCCAATCCCCAGCCTAAAACTCAGGCTGTGAAGGGGGGAATGTGTGGCGGATTTCGAATCGGCCGGCCAAGCGGAAGGAGCTTTGGGCGTCCTGGTCCTTCAATGAACCGTCCGAATTTCCCATATGGAAGAGCTGTACGAGGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_27233.p1 GENE.R_Transcript_27233~~R_Transcript_27233.p1 ORF type:5prime_partial len:424 (+),score=140.38,RRM_1|PF00076.18|1.1e-18,RRM_1|PF00076.18|6.6e-08,RRM_1|PF00076.18|2.2e-14,RRM_6|PF14259.2|2.2e-11,RRM_6|PF14259.2|0.00054,RRM_6|PF14259.2|9.2e-09,RRM_5|PF13893.2|2.1e-06,RRM_5|PF13893.2|0.053,RRM_5|PF13893.2|0.0014,Nup35_RRM_2|PF14605.2|0.11,Nup35_RRM_2|PF14605.2|0.0073,RRM_7|PF16367.1|0.094,RRM_7|PF16367.1|8.5e+02,RRM_7|PF16367.1|0.044 R_Transcript_27233:2-1273(+)
QNPEDVKDDQKPEVVKDDQNPENVKDDQNPEDVKGEQKAENVDDKPVGKVEEEGAQAKDGPPAEAMEDYGEEEGFVEPGEEDLQEDDEPESVDDYKASDEEHKELAAAAKERKIKKELEIFVGGLDREVVEDDVKKAFDKIGEVLEVRLLKDPSTNKNRGFAFVRFATKEQAKRALSEMKNPVIRGKRCGAAPNEDNDTLFIGNICNTWTKEAIKQKLKDYNVEGVENITLVQDPRHEGLSRGFCFIQFACHADAMFAYKRLQKPDAIFGHTERTAKVAFAEPLQEPDPAVMAKVKSVFVDGLPPHWDEDRVRKHFKNYGEIERITLARNMSSAKRKDFGFVDFTTHEAAITCIDDLKSKELVDGNVKTKVKARLSNPQPKTQAVKGGMCGGFRIGRPSGRSFGRPGPSMNRPNFPYGRAVRG*

Click here to download the sequence:
Link to NCBI Protein BLAST