Transcript Information: R_Transcript_272331.p1


Annotated TAIR IDAT5G05800.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:1743234-1744751 | Reverse length=449
E-Value3E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.779340964869
Replicate 218.655249498801
Replicate 315.803254508844
Condition 2: 8 Hour
Replicate 120.305351419667
Replicate 218.465257827042
Replicate 320.871189911943
Condition 3: 24 Hour
Replicate 122.957807227704
Replicate 219.903526315887
Replicate 318.303307055245


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_272331.p1 GENE.R_Transcript_272331~~R_Transcript_272331.p1 ORF type:complete len:287 (+),score=61.28,Myb_DNA-bind_3|PF12776.3|4.9e-20 R_Transcript_272331:262-1122(+)
ATGGCAGACTCAAATCATGGTGTTGGTATTGGTGACAACGAAGTCCAAGAGATTGATGGAGCAGATAATATGTGGACCGAAAAACTTGAATCTTATTTTGTATCTTTAATGGTGGATGAAATAATCAAGGGAAGGATGCAAGCTACTACTTTTGCCAATGCAGCTTGGCAAACTATTTCTGCTGCATTAAAAAAGAAAACAGGAAAGGAATATACATATTACCAATTGAAGAATAAGTATCATAACTTGAGGGCTCGATGGAGTGATTTTAGTAACCTGTTGAATGAGAATGAAGTTAGGTACAACTCAGCAACAGGGCAAGTTATTGCCACGGATGATGTATGGAGAAGATTATTGCCGAGATATCGACGAGCAAAAACTTTTAGAAAGAAAGGATTGAAAGACTATGACAAGTTGTGCATTGTCTTTGGTGGCCCAGAACTTGAATCCGTTAGAGAGGATTGGGGAATAAAGTATCAAGTGCATTATGATTCCAGTCAAGAAGATGGAGATGCCTCTAGAGCGACAGAAAGTGAAAAGATTCAAAAGCCGACACCTCTGGCCATGAGGCCTGTGATCATAATGGGAGAGAATTCTCATAAGAAACGAAAATTGGAGAAGAAGTTGAGTGATACTGCTTCCTTGGATTCAGTTGGCAATAGCAGTGATGGTGGTGGATGCCAAACTGGCCATGTCCGGGATGATGTTGTAAGATGCATGGAGGCACTTAACTCGCTAGAAGGCATCGATGGAGCATCATATGTAAAGGCAACGAGGTACATCCATGACGACCCCTTATGGAGAAAAATGTTTCTTTGCATGCCAGACGAAAGGAAGAAAGATTGGGTGCTCAACATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_272331.p1 GENE.R_Transcript_272331~~R_Transcript_272331.p1 ORF type:complete len:287 (+),score=61.28,Myb_DNA-bind_3|PF12776.3|4.9e-20 R_Transcript_272331:262-1122(+)
MADSNHGVGIGDNEVQEIDGADNMWTEKLESYFVSLMVDEIIKGRMQATTFANAAWQTISAALKKKTGKEYTYYQLKNKYHNLRARWSDFSNLLNENEVRYNSATGQVIATDDVWRRLLPRYRRAKTFRKKGLKDYDKLCIVFGGPELESVREDWGIKYQVHYDSSQEDGDASRATESEKIQKPTPLAMRPVIIMGENSHKKRKLEKKLSDTASLDSVGNSSDGGGCQTGHVRDDVVRCMEALNSLEGIDGASYVKATRYIHDDPLWRKMFLCMPDERKKDWVLNI*

Click here to download the sequence:
Link to NCBI Protein BLAST