Transcript Information: R_Transcript_272411.p1


Annotated TAIR IDAT4G39080.1
Annotated Gene Namevacuolar proton ATPase A3
Annotated Gene Symbol(s)VHA-A3
Annotation TypeOrtholog
Chromosome Positionchr4:18209513-18214752 | Forward length=821
E-Value1.7E-79
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 132.602109450914
Replicate 217.233957567135
Replicate 335.750399716539
Condition 2: 8 Hour
Replicate 129.581189444938
Replicate 233.73520324017
Replicate 348.47424339086
Condition 3: 24 Hour
Replicate 138.882297790273
Replicate 231.361813220127
Replicate 335.172149728078


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_272411.p1 GENE.R_Transcript_272411~~R_Transcript_272411.p1 ORF type:3prime_partial len:173 (-),score=11.60,V_ATPase_I|PF01496.15|6.4e-49 R_Transcript_272411:1-516(-)
ATGTCCACACAGCTTCTAAAGAATTTGGCATTAAAAAAACTCATTATGATCCCCAGGTTCATTTGTGCAACCCCAAGGAGGATTGACATCTTCATCTTCAGTGAGTTAAGAAAAGGCAACTCACTGAAGATGAAGATGTCAATCCTCCTTGGGGTTGCACAAATGAACCTGGGGATCATAATGAGTTTTTTCAATGCCAAATTCTTTAGAAGCTGTGTGGACATATGGTTCCAGTTTATTCCCCAGATTATCTTTCTAAACAGTTTGTTTGGCTACCTCTCTGTTCTCATTATTATAAAGTGGTGTACTGGCTCTAAAGCAGATTTGTATCACATAATGATCTACATGTTTTTAAGCCCTACCGATGAGTTGGGTGAAAATGAGTTATTCACAGGACAGAAGACTGCTCAGATTGTGTTACTGTTGCTAGCCCTTGTGTCTGTGCCCTGGATGCTTCTTCCCAAGCCCTTTATCCTGAAAGTACAGCACCAGAATAGACATCAGGGTGAGTCGTAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_272411.p1 GENE.R_Transcript_272411~~R_Transcript_272411.p1 ORF type:3prime_partial len:173 (-),score=11.60,V_ATPase_I|PF01496.15|6.4e-49 R_Transcript_272411:1-516(-)
MSTQLLKNLALKKLIMIPRFICATPRRIDIFIFSELRKGNSLKMKMSILLGVAQMNLGIIMSFFNAKFFRSCVDIWFQFIPQIIFLNSLFGYLSVLIIIKWCTGSKADLYHIMIYMFLSPTDELGENELFTGQKTAQIVLLLLALVSVPWMLLPKPFILKVQHQNRHQGESY

Click here to download the sequence:
Link to NCBI Protein BLAST