Transcript Information: R_Transcript_272689.p1


Annotated TAIR IDAT5G11780.1
Annotated Gene Nameunknown protein; Has 37 Blast hits to 37 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:3793928-3795983 | Forward length=504
E-Value3E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4107684279817
Replicate 22.1128352620174
Replicate 31.2966077884615
Condition 2: 8 Hour
Replicate 11.8479898073393
Replicate 21.5469792468745
Replicate 33.0823489732733
Condition 3: 24 Hour
Replicate 13.465329392861
Replicate 23.3290956815966
Replicate 34.4050726413881


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_272689.p1 GENE.R_Transcript_272689~~R_Transcript_272689.p1 ORF type:internal len:159 (-),score=22.73 R_Transcript_272689:2-475(-)
GAGGGTTTAGTGAGTTTTATCAGTTTGTGCTGTTGTGAAGGGGTGGATGATCATGATGACTCTTTACCCTTTTCGCCGTGCTTTGTGGATTTGGTTAAAGTTTGGACCGTTCGAAGGCGGGAGAGAGAGTTCGGGTTTGATGATGATTTTAGGATATTTTTCCCTATGGTTAATGATGAGGTTCGTAACAGCCTTCTTGCTGGTGATGGTAATGGGGTCGGTTTTCTAGCTGGGGTTGTTATGTGCCAGGCCTTTTTGCTTAGTCTTTGCTTCAAGTTTGGCCTGGAGGAACCACAAATGAAACAGGATGATGATGTTCGGAATTTAGCGGTTAATACCATCACTGGATTTCGGAGTTGTTACTTCTTTGATATTCTTCTGAAGGCGCTATTGGACTCAAGCTTGCCGGTCACCTCCCTGATGGTAAGTATATCTGTTTTACACTTTGAAATGATAGGCTGTCTAAACATTTAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_272689.p1 GENE.R_Transcript_272689~~R_Transcript_272689.p1 ORF type:internal len:159 (-),score=22.73 R_Transcript_272689:2-475(-)
EGLVSFISLCCCEGVDDHDDSLPFSPCFVDLVKVWTVRRREREFGFDDDFRIFFPMVNDEVRNSLLAGDGNGVGFLAGVVMCQAFLLSLCFKFGLEEPQMKQDDDVRNLAVNTITGFRSCYFFDILLKALLDSSLPVTSLMVSISVLHFEMIGCLNIY

Click here to download the sequence:
Link to NCBI Protein BLAST