Transcript Information: R_Transcript_27297.p1


Annotated TAIR IDAT1G50575.1
Annotated Gene NamePutative lysine decarboxylase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:18728862-18730296 | Reverse length=306
E-Value1.8E-121
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.763950292405
Replicate 212.664435171735
Replicate 317.452752454211
Condition 2: 8 Hour
Replicate 116.712574487802
Replicate 217.865043164122
Replicate 320.936778387536
Condition 3: 24 Hour
Replicate 120.892819276006
Replicate 217.50417372268
Replicate 323.045784299961


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_27297.p1 GENE.R_Transcript_27297~~R_Transcript_27297.p1 ORF type:5prime_partial len:378 (+),score=50.32,Lysine_decarbox|PF03641.10|1.5e-26 R_Transcript_27297:1-1134(+)
AATTGGAATTGGTATCCAATACATCCTTTATTTGCCCTAAATCCCAATTCCAATCCCTTATTAGCCACCTTTCCCCCCCATGTCCTTTACTCAATCCATTCTTCCGCCAGTCACCCTCATCACAAAGTTAAGAGATGCCATTCTCATCCAACACTTTCTTTCCCTTTCAAGAGCCAACTTTACCATTTTCATCTCCAATCTAATTCACCCATCTTGGCTGTCTTCTCAGCACTAATGGGATTCACCAATTTGGCTCTATCATCAGGTTCTCATGCCTCAATCACTCCATTATTCGACAAGTTTGATATAAAGCTTCAATCTTTCTTTGATTTCAAGCTAAGTAGAAGGTCAAGAAGGGTTCGATTTACTAAATTTGAAATGCCCATTTGTTGCAAAAGAATGGAATCAATTGACTTTGGAGAAAGAACAAGTGCAAATGAGGTCAGAAAGGAGATTGAACGGTGCTATGAACTAATTCACAGGCTAGGTAGGGGAGTTATCTACCTTGGCTCTGCAAGACCAGCAACTAATCATTCACATTACATTCAAGCACTTGAGCTGAGCAGAGAGGTTGCGAATCTATTACAGTGCACTACATGGACAGGAGCTGGTCCAGGCCTTATGGATGCCGCCATTAAGGGCGCATTGCAAGCTGGGAAGCCAGTTGGTGGATTTAAAATCGCGAAAGAAGCTGGTCAATGGAGTTCCACAGGCTTTCACCCCTACCTCCCCCAAGATACATATCTTACTTGTAGATTTTTCTCGGCAAGGAAACATGGTCTTGTGGACGCTGCAGTGAGAAACAGAAGCTCAGATCGAACGGGTGTGATTGCTCTTCCCGGTGGGATTGGTACTCTCGATGAGATGTTTGAGATTCTAGCACTAATTCAGCTGGAGCGGATAGGGTCGCAGCTTCCAGTTCCGTTCCTGCTTATGAATTATGATGGTTACTACTCCAAGCTGCTGGATTTTCTCAGTGACTGTGAGAATTGGGGCACTCTTGCAAAGGGAGAGGTGGAATCTCTTTGGAAGGTGTTTGATAACAACAAAGAAGCACTGGCCTATTTAGCCCAGTTTTATGATCTTCCTGTCAGCATTGAAGGGTTGAAAGAACATGAGACAAGAACTGCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_27297.p1 GENE.R_Transcript_27297~~R_Transcript_27297.p1 ORF type:5prime_partial len:378 (+),score=50.32,Lysine_decarbox|PF03641.10|1.5e-26 R_Transcript_27297:1-1134(+)
NWNWYPIHPLFALNPNSNPLLATFPPHVLYSIHSSASHPHHKVKRCHSHPTLSFPFKSQLYHFHLQSNSPILAVFSALMGFTNLALSSGSHASITPLFDKFDIKLQSFFDFKLSRRSRRVRFTKFEMPICCKRMESIDFGERTSANEVRKEIERCYELIHRLGRGVIYLGSARPATNHSHYIQALELSREVANLLQCTTWTGAGPGLMDAAIKGALQAGKPVGGFKIAKEAGQWSSTGFHPYLPQDTYLTCRFFSARKHGLVDAAVRNRSSDRTGVIALPGGIGTLDEMFEILALIQLERIGSQLPVPFLLMNYDGYYSKLLDFLSDCENWGTLAKGEVESLWKVFDNNKEALAYLAQFYDLPVSIEGLKEHETRTA*

Click here to download the sequence:
Link to NCBI Protein BLAST