Transcript Information: R_Transcript_273116.p1


Annotated TAIR IDAT1G76490.1
Annotated Gene Namehydroxy methylglutaryl CoA reductase 1
Annotated Gene Symbol(s)HMG1, HMGR1, AtHMGR1
Annotation TypeOrtholog
Chromosome Positionchr1:28695801-28698206 | Forward length=642
E-Value1.8E-248
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.24153256461821
Replicate 20.43659603890223
Replicate 30.5629254985822
Condition 2: 8 Hour
Replicate 10.37029663436288
Replicate 20.54951127397999
Replicate 31.4068356057389
Condition 3: 24 Hour
Replicate 11.6925415536493
Replicate 21.6676944340701
Replicate 32.2342836542391


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_273116.p1 GENE.R_Transcript_273116~~R_Transcript_273116.p1 ORF type:complete len:529 (+),score=79.53,HMG-CoA_red|PF00368.14|1.8e-138 R_Transcript_273116:266-1852(+)
ATGGGCATTATTCGCCGGCGACGACCTGCCGCCAAGCGGTTGTGGTCATCCACCGCCGGCAATGGTGTTGTCTTCACTCTATTCTCCTCCGCCGCGTACTTCCTCCTCCGTCAATGGAGGGAAGAAATCCGCGACTCGGTCCCTCTCCATGTGGCTTTCCTTTTCATGATCGCTTCCGTGGTCTACCTGTTCGGGTTCTTCGGTATTGACCTCGCCCGTGCCTCGTCTCCCAACTCTTTATCCTCGTCCCCGTCCCCAGCGGACGAGGTCAATCCCAAAGAACCACCACCAGCCACCACTGACCGCTTTGGGGATGGGGACAAGGACAAAAATGACGACGATATTGTGAGGTCAGTGGTGGCGGGGACCACCCCTTCCTACTCACTAGAGGCTCGCCTCGGTGGGGACCACAAGAGGGCGGCCCAAGTGAGGAGGAAGGCGGTCGAACAAACCACGGGTAGGTCCCTGAGGGACCTACCCGTGGAAGGGTTCGACTATGAGGGCATACACGGGCAGTGCTGCGAGCTGCCCGTGGGGTACATACAGGTGCCTGTGGGGGTGGTGGGCCCGCTGGTGCTCGATGGGGCACAGTACTACGTTCCGATGGCGACGACGGAGGGTTGCCTGGTGGCTAGCACCAATAGAGGGTGTAAGGCGGTCTGTCTTTCAGGTGGCGCTACGAGTGTTGTGGTCCGTGATAGCATGACACGAGCTCCTGTTGTTCGGTTTACGTCGGCAAAGAGAGCTGCTGAGGTCAAAGACTTTGTTGAGGAGCCTATCAACTTTGATACTATCACTGTCGTTTTCAACAGATCAAGCAGATTTGCAAGGTTGCAAAGCATCAAATGCACAATGGCAGGGAAGAATTTATACATGAGGTTTAGCTGCACCACTGGGGATGCAATGGGGATGAACATGGCCTCCAAAGGAGTCCAAAATGTCCTTGAATACCTTCATCTTCGATTCCCTGACATGGATATTATCGGCATCTCGGGAAATTACTGCTCAGACAAGAAAGCAGCAGCAGTGACCTGGATTGAAGGCAGGGGAAAATCAGTGGTGTGTGAGGCAATCATCAAAGGAGAAGTGGTAAAAAAGCTTTTGAAGACAAGTGTTGAAGCTCTTGTTGAGCTTAATACCCTCAAGAACCTCGCTGGATCGGCCATGGCAGGATCGATGGGGGGATTCAATGCCCATGCTAGCAACATTGTGACTGCAATTTACATAGCCACAGGACAGGACCCTGCTCAGAATGTGGAGAGCTCTAATTGCCTAACTATGATGGAAGCTGTTAATCATGGCAATGACCTACATGTTTCTGTCACTATGCCCTCTATTGAGGTAGGCACAGTAGGAGGTGGTACACAGCTAGCATCACAAGCAGCATGTTTGAACTTACTAGGGGTGAAGGGGGCAAACAAGGAGATAGAAGGGGCAAACTCAAGGCTTTTGGCAACAATTGTAGCAGCTTCTGTTCTTGCTGGAGAGCTCTCCCTTATGTCTGCAATTGCAGCAGGACAACTTGTTAAGAGCCACTTGAAATACAACAGATCAAGCAAGGATATAGCCAGCATTGTCTCTAATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_273116.p1 GENE.R_Transcript_273116~~R_Transcript_273116.p1 ORF type:complete len:529 (+),score=79.53,HMG-CoA_red|PF00368.14|1.8e-138 R_Transcript_273116:266-1852(+)
MGIIRRRRPAAKRLWSSTAGNGVVFTLFSSAAYFLLRQWREEIRDSVPLHVAFLFMIASVVYLFGFFGIDLARASSPNSLSSSPSPADEVNPKEPPPATTDRFGDGDKDKNDDDIVRSVVAGTTPSYSLEARLGGDHKRAAQVRRKAVEQTTGRSLRDLPVEGFDYEGIHGQCCELPVGYIQVPVGVVGPLVLDGAQYYVPMATTEGCLVASTNRGCKAVCLSGGATSVVVRDSMTRAPVVRFTSAKRAAEVKDFVEEPINFDTITVVFNRSSRFARLQSIKCTMAGKNLYMRFSCTTGDAMGMNMASKGVQNVLEYLHLRFPDMDIIGISGNYCSDKKAAAVTWIEGRGKSVVCEAIIKGEVVKKLLKTSVEALVELNTLKNLAGSAMAGSMGGFNAHASNIVTAIYIATGQDPAQNVESSNCLTMMEAVNHGNDLHVSVTMPSIEVGTVGGGTQLASQAACLNLLGVKGANKEIEGANSRLLATIVAASVLAGELSLMSAIAAGQLVKSHLKYNRSSKDIASIVSN*

Click here to download the sequence:
Link to NCBI Protein BLAST