Transcript Information: R_Transcript_273120.p1


Annotated TAIR IDAT1G76490.1
Annotated Gene Namehydroxy methylglutaryl CoA reductase 1
Annotated Gene Symbol(s)HMG1, HMGR1, AtHMGR1
Annotation TypeHomolog
Chromosome Positionchr1:28695801-28698206 | Forward length=642
E-Value7E-141
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.11826972540854
Replicate 20.58952895337338
Replicate 30.19789838096028
Condition 2: 8 Hour
Replicate 10.84616379947284
Replicate 20.53125205238238
Replicate 30.50965645370417
Condition 3: 24 Hour
Replicate 10.39667917456076
Replicate 20.61926212867712
Replicate 30.56728392277056


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_273120.p1 GENE.R_Transcript_273120~~R_Transcript_273120.p1 ORF type:complete len:463 (+),score=55.04,HMG-CoA_red|PF00368.14|7.1e-105 R_Transcript_273120:266-1654(+)
ATGGGCATTATTCGCCGGCGACGACCTGCCGCCAAGCGGTTGTGGTCATCCACCGCCGGCAATGGTGTTGTCTTCACTCTATTCTCCTCCGCCGCGTACTTCCTCCTCCGTCAATGGAGGGAAGAAATCCGCGACTCGGTCCCTCTCCATGTGGCTTTCCTTTTCATGATCGCTTCCGTGGTCTACCTGTTCGGGTTCTTCGGTATTGACCTCGCCCGTGCCTCGTCTCCCAACTCTTTATCCTCGTCCCCGTCCCCAGCGGACGAGGTCAATCCCAAAGAACCACCACCAGCCACCACTGACCGCTTTGGGGATGGGGACAAGGACAAAAATGACGACGATATTGTGAGGTCAGTGGTGGCGGGGACCACCCCTTCCTACTCACTAGAGGCTCGCCTCGGTGGGGACCACAAGAGGGCGGCCCAAGTGAGGAGGAAGGCGGTCGAACAAACCACGGGTAGGTCCCTGAGGGACCTACCCGTGGAAGGGTTCGACTATGAGGGCATACACGGGCAGTGCTGCGAGCTGCCCGTGGGGTACATACAGGTGCCTGTGGGGGTGGTGGGCCCGCTGGTGCTCGATGGGGCACAGTACTACGTTCCGATGGCGACGACGGAGGGTTGCCTGGTGGCTAGCACCAATAGAGGGTGTAAGGCGGTCTGTCTTTCAGGTGGCGCTACGAGTGTTGTGGTCCGTGATAGCATGACACGAGCTCCTGTTGTTCGGTTTACGTCGGCAAAGAGAGCTGCTGAGGTCAAAGACTTTGTTGAGGAGCCTATCAACTTTGATACTATCACTGTCGTTTTCAACAGATCAAGCAGATTTGCAAGGTTGCAAAGCATCAAATGCACAATGGCAGGGAAGAATTTATACATGAGGTTTAGCTGCACCACTGGGGATGCAATGGGGATGAACATGGCCTCCAAAGGAGTCCAAAATGTCCTTGAATACCTTCATCTTCGATTCCCTGACATGGATATTATCGGCATCTCGGGAAATTACTGCTCAGACAAGAAAGCAGCAGCAGTGACCTGGATTGAAGGCAGGGGAAAATCAGTGGTGTGTGAGGCAATCATCAAAGGAGAAGTGGTAAAAAAGCTTTTGAAGACAAGTGTTGAAGCTCTTGTTGAGCTTAATACCCTCAAGAACCTCGCTGGATCGGCCATGGCAGGATCGATGGGGGGATTCAATGCCCATGCTAGCAACATTGTGACTGCAATTTACATAGCCACAGGACAGGACCCTGCTCAGAATGTGGAGAGCTCTAATTGCCTAACTATGATGGAAACCGAGCCGTCAGTCCCTGCTCGACTCTTTCTCTCTCCTTTTCTCTATTTTCTTTTTGTGGGATTTTTGGGTTTATATTATAGGTTTTCTTGGTTGGATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_273120.p1 GENE.R_Transcript_273120~~R_Transcript_273120.p1 ORF type:complete len:463 (+),score=55.04,HMG-CoA_red|PF00368.14|7.1e-105 R_Transcript_273120:266-1654(+)
MGIIRRRRPAAKRLWSSTAGNGVVFTLFSSAAYFLLRQWREEIRDSVPLHVAFLFMIASVVYLFGFFGIDLARASSPNSLSSSPSPADEVNPKEPPPATTDRFGDGDKDKNDDDIVRSVVAGTTPSYSLEARLGGDHKRAAQVRRKAVEQTTGRSLRDLPVEGFDYEGIHGQCCELPVGYIQVPVGVVGPLVLDGAQYYVPMATTEGCLVASTNRGCKAVCLSGGATSVVVRDSMTRAPVVRFTSAKRAAEVKDFVEEPINFDTITVVFNRSSRFARLQSIKCTMAGKNLYMRFSCTTGDAMGMNMASKGVQNVLEYLHLRFPDMDIIGISGNYCSDKKAAAVTWIEGRGKSVVCEAIIKGEVVKKLLKTSVEALVELNTLKNLAGSAMAGSMGGFNAHASNIVTAIYIATGQDPAQNVESSNCLTMMETEPSVPARLFLSPFLYFLFVGFLGLYYRFSWLD*

Click here to download the sequence:
Link to NCBI Protein BLAST