Transcript Information: R_Transcript_273169.p1


Annotated TAIR IDAT2G32590.1
Annotated Gene NameLOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Barren (InterPro:IPR008418); Has 467 Blast hits to 447 proteins in 202 species: Archae - 0; Bacteria - 4; Metazoa - 147; Fungi - 168; Plants - 39; Viruses - 1; Other Eukaryotes - 108 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:13829420-13833209 | Reverse length=671
E-Value2E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3921749880718
Replicate 20.53380424787198
Replicate 32.1353738437091
Condition 2: 8 Hour
Replicate 10.8300293202456
Replicate 20.94749499327058
Replicate 30.76913604323674
Condition 3: 24 Hour
Replicate 10.77823075348149
Replicate 20.56072692094688
Replicate 31.1129341366219


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_273169.p1 GENE.R_Transcript_273169~~R_Transcript_273169.p1 ORF type:5prime_partial len:118 (+),score=15.55,Cnd2|PF05786.10|3.5e-24 R_Transcript_273169:3-356(+)
AAAGTTGAAGTTCAATATGATAAAACTTCAAAACAAGTTGATGTGCATTTGCTGAAGGAAACACTTTGGAATCACATGCAAGGATCATTCCAGACACCTGAAAATGAAACGAGTTTTCTCACAAAGGATGCCGTATCATTCAAACATATACTAGCGACCTTTCCTGACGATTGCCATGCTGCTGCAAGCCAGGACATCTCCCCTCATCTATGTTTCATTTGTGCCCTGCATCTTGCAAATGAACATGGATTGATAATCAAAGGCTCCCCCAAATTGGACGACCTTAGAATTCACATTCCTTATGCATATGAGAACAAAGGCAGTAACACGGGCGAAGTTACTCAAGCATTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_273169.p1 GENE.R_Transcript_273169~~R_Transcript_273169.p1 ORF type:5prime_partial len:118 (+),score=15.55,Cnd2|PF05786.10|3.5e-24 R_Transcript_273169:3-356(+)
KVEVQYDKTSKQVDVHLLKETLWNHMQGSFQTPENETSFLTKDAVSFKHILATFPDDCHAAASQDISPHLCFICALHLANEHGLIIKGSPKLDDLRIHIPYAYENKGSNTGEVTQAF*

Click here to download the sequence:
Link to NCBI Protein BLAST