Transcript Information: R_Transcript_27334.p1


Annotated TAIR IDAT1G43760.1
Annotated Gene NameDNAse I-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16528880-16531065 | Reverse length=626
E-Value2E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1900124995554
Replicate 20.75814123870284
Replicate 30.91902658359689
Condition 2: 8 Hour
Replicate 10.88414356880725
Replicate 20.69527315654639
Replicate 31.1834049050403
Condition 3: 24 Hour
Replicate 10.99015617932926
Replicate 20.50879734652285
Replicate 30.81228191917272


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_27334.p1 GENE.R_Transcript_27334~~R_Transcript_27334.p1 ORF type:complete len:997 (+),score=93.83,RVT_1|PF00078.23|7e-40,Exo_endo_phos|PF03372.19|1.6e-14 R_Transcript_27334:2245-5235(+)
ATGGACGCCCTTCCAGTACCTCTTCACCTACCTCCTCTCCCCACCTCCACAATCCCCCCGGACTTGACAATATGTGCTGGGTCCCAGATGGAGGGCCCGGTGACTGCAGTGGCCCTGAAAATCTTTCACAAGCTGGAGATACACATGGATGTATTTCAAGAGCCACGACAGGCTCGACCCGAACTCCTTATTGATATTTCTATCCCACCAGGGATTTCCAGAATCATTAACATGATACGTGAAGTATACATGACATCCTTATCACATATACCGGTTTTAATGGAAGAGTCATATCCAAACTTTGCTCAACACACAACTCCTCTAAACGTGATGGTATGGAATACCCAAGGGGCAGAAAGCGCTGCTTTTCTTGCCACTTTGAAAGAGATTTTAAGAAGGAAAAAACCTTCGGTTATTGCCCTGGTGGAGACTCATCTAGATGGGGATAGGGCGACACGACTTGCTTCCCAAATCAACTACACAGGACACCTTAGGGTGGATGCACAAGGGTTCAGGGGAGGAATCTGGTTGTATTGGAAGCCTGAGCTGGTAAGGGTCAATCTTGTTTCCCAACACCCCCAGCACTTAACTGTGGAGGTCTCAAGAGCTGGTGAAGACCCTTGGTTCTTTTCCGCTGTCTATGCGAGCCCTGATCACACATCTCGCAGAGAACTATGGGAAGAATTAAGTCGGTTAGCCAGCACAATGAATCTTCCTTGGTTGTTGGCAGGGGATTTTAACGAGACTAGATCCCTCCAGGAGAGACATGGGGGTGATGCCCACATGCAACGACGTTGTGATGAATTCAATCACTGGATTGAAATTTGTGCTTTGATTGATCTGGGTTACGTGGGACCGAGTTATACTTGGGCTAGGGGTAACACACCGGAATCTCGCAAGTGGGCAAGGCTTGATCGGGGCCTTTGCAACCAAGCTTGGCGCATGCGTTTTGAAGAGGCCTCAGTTTTACATATGGTAGCCAACCAATCTGATCATTGTCCTCTACTCATTGCACCAAACGGCTTTGCTCCTATTGATCATCCGCAACGTCCTTTTCGTTTTTTAGCTTCTTGGATGACACATGAGAAATTTGAAGATTTTCTCTCTACCACATGGAATAATCAAGCCCCACTGGTACAAACTTTGGCAGATTTTGCTGATGCCTTGCTACAATGGAACAAAAACGTGTTTGGAAATATTTTTAGAAAGAAAAATCTTATCTGGGCACGTTTACTTGGGGTACAAAAGGCACTCTCGCAAGGAGGGCCCCGATACCTGTTGAAGAAAGAAGCGAAGCTGCGAAGAGACTTAGATGAGATATTGGCACAGGAGGAGAACTTATGGTACCAAAAATCAAGGCAGGAGGCCATTAGAGATGGAGATAGAAATACTAGGTATTATCACACCTCCACAATCATGAGAAGAAACAGAAACAGGATAGGAGCACTCAAGAATGATGAGGATGTTTGGATAACTGATCAAACACAGCTAAGAGAACATGTGAGAAACTACTACATACAGCTCTTCACACATGAGAACTCAGAGGAGCCCACTACCCCCTATCCCACCGACCTGTTTCCACCGATTCTATCTGGGGATTGGCATAACCTTTGTCGCCCTTACACTGAAAGTGATATCCTAGCAGCGCTAAAAGGCATGGGAGCTTATAAAGCACCTGGTCCGGACGGTTTCCAGGCACTATTTTTTCAACGAAACTGGGACAAGGTTAAAGACAGTGTGTGCAAAACAGTCTTGGACACCTTGGAGGGCAGAGAATTACCCCAGAAACTTAACGAAACTTTCTTGGTCTTGATACCTAAGGTGGATACCCCTGGGAGCATTAAGCAATTCCGTCCGATTGGCTTGTGCAATGTTATTTATAAATTAATTACCAAGACCATCGTGAACAGGATTAAACCCCTCTTGCCGAAGATGATTTCTCCTACACAATCAAGTTTCGTGCCAGGAAGACAGATCACGGACAATGTTATCATTGTGCAAGCAGTGCTTTACTCGCTACGCCAAAAGAAAGGGAGTAAGGGTTATATGGTAATTAAGATCGACTTGGAGAAGGCGTATGAACGCCTTCGGTGGGATTTCATAGACGAGACTCTAATGGATATGGGCCTCCCTATCCTCATGCGTGAAGTCATAATGCAGTGTGTCTCTACTTCCTCCATGCAGATTTTATGGAATGGCTCACCCACGGAAAAGTTTACACCATCCCGGGGGATTCGTCAGGGAGACCCCCTCTCCCCATATTTGTTTGTCATGTGCGTTGAAAGATTAAACCAACTCATTGAACAAGCAGTCAGAGAGGGTGCATGGAAACCAGTGAGATGTAATAGAGGTGGACCTCAAATTTCCAATCTGTTCACCGAAGACATGATACTCTTCGCTGAAGCCACTGTGGAGCAGGCCTTGGTTATTCAGAAATGTCTTCAGAACTTTTGTAGTGCTTCTGGACAAAAGGTTTCCAATGCAAAGTCCAAAATATTTTTCTCCCAGAACGTGGAGTCGGACATTGCGAATAGCATTGCAAGCACAATCGGCTTTGAGCGAACTGAGGATTTAGGGACTTACCTTGGAATGCCATTGATCAACGGAAGAGTGACTAAAGCGACCTACCAGCACATCATAGACAAGGTGGATCGTAAACTAAGTGGTTGGAAAGCAAGATGTTTATCTCTCGCAGGGAGGGCTACACTGGTTCAATCGGCCCTCTCATCTATTCCTTACTACTCCATGCAATCTGCGAAAATCCCGAGAACAACCTGTGATGAGATAGACCGAAAATCTCGAAGATTCCTGTGGGGTGGCGATGAAGATCACTCCCGCATCCATTTGGTGAAATGCAACCAAGTGCAAAGGGCGAAGAACGAGGGAGGGCTTGGTTTGCGTAGCATGAGACAAGCCAATGCTGCCTTTTTAATCAAGCTTGGATGGCGGGTCCTAACAGAACCAAACTCCTTGTGGTCAAGCGTTCTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_27334.p1 GENE.R_Transcript_27334~~R_Transcript_27334.p1 ORF type:complete len:997 (+),score=93.83,RVT_1|PF00078.23|7e-40,Exo_endo_phos|PF03372.19|1.6e-14 R_Transcript_27334:2245-5235(+)
MDALPVPLHLPPLPTSTIPPDLTICAGSQMEGPVTAVALKIFHKLEIHMDVFQEPRQARPELLIDISIPPGISRIINMIREVYMTSLSHIPVLMEESYPNFAQHTTPLNVMVWNTQGAESAAFLATLKEILRRKKPSVIALVETHLDGDRATRLASQINYTGHLRVDAQGFRGGIWLYWKPELVRVNLVSQHPQHLTVEVSRAGEDPWFFSAVYASPDHTSRRELWEELSRLASTMNLPWLLAGDFNETRSLQERHGGDAHMQRRCDEFNHWIEICALIDLGYVGPSYTWARGNTPESRKWARLDRGLCNQAWRMRFEEASVLHMVANQSDHCPLLIAPNGFAPIDHPQRPFRFLASWMTHEKFEDFLSTTWNNQAPLVQTLADFADALLQWNKNVFGNIFRKKNLIWARLLGVQKALSQGGPRYLLKKEAKLRRDLDEILAQEENLWYQKSRQEAIRDGDRNTRYYHTSTIMRRNRNRIGALKNDEDVWITDQTQLREHVRNYYIQLFTHENSEEPTTPYPTDLFPPILSGDWHNLCRPYTESDILAALKGMGAYKAPGPDGFQALFFQRNWDKVKDSVCKTVLDTLEGRELPQKLNETFLVLIPKVDTPGSIKQFRPIGLCNVIYKLITKTIVNRIKPLLPKMISPTQSSFVPGRQITDNVIIVQAVLYSLRQKKGSKGYMVIKIDLEKAYERLRWDFIDETLMDMGLPILMREVIMQCVSTSSMQILWNGSPTEKFTPSRGIRQGDPLSPYLFVMCVERLNQLIEQAVREGAWKPVRCNRGGPQISNLFTEDMILFAEATVEQALVIQKCLQNFCSASGQKVSNAKSKIFFSQNVESDIANSIASTIGFERTEDLGTYLGMPLINGRVTKATYQHIIDKVDRKLSGWKARCLSLAGRATLVQSALSSIPYYSMQSAKIPRTTCDEIDRKSRRFLWGGDEDHSRIHLVKCNQVQRAKNEGGLGLRSMRQANAAFLIKLGWRVLTEPNSLWSSVL*

Click here to download the sequence:
Link to NCBI Protein BLAST