Transcript Information: R_Transcript_27342.p1


Annotated TAIR IDAT2G33205.1
Annotated Gene NameSerinc-domain containing serine and sphingolipid biosynthesis protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:14070987-14073211 | Reverse length=422
E-Value1.2E-187
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.819398936792
Replicate 213.116453704243
Replicate 317.628938197514
Condition 2: 8 Hour
Replicate 17.8517619189504
Replicate 210.091609382008
Replicate 314.745488912523
Condition 3: 24 Hour
Replicate 118.758873364205
Replicate 215.454397559906
Replicate 318.82030664289


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_27342.p1 GENE.R_Transcript_27342~~R_Transcript_27342.p1 ORF type:complete len:421 (+),score=42.39,Serinc|PF03348.11|5.3e-53,Serinc|PF03348.11|9.7e-18 R_Transcript_27342:536-1798(+)
ATGGTGAATTCTACTACGGCCACAGGGATGGCTAATGCTAATACGAGGGGTGGTGAGGCTGTTTACTTGGAAGATTTGTCCATGTCTCCGAAAATGAATAGCAATGAGACCGCTTTACAAAGGACGAGATCCTTGAGAGCTCGTTATTACTATGGAATTATCTTCTTGCTTACCAGTCTTCTAGCCTGGTTTATTCGGGATTATATCCAAAAAGTTATTCCTGAAAATCATTTTCATAAAACTTGTGGAATTGGAGGGCGTGATTGCGTTCAAACAATGGGAGTTCTTCGCGTCAGTTTTGGATGTTTTATATTTTTCTTTTTGATGTTCCTCAAGACAGTTAAGACCAGCAAGTTATATGAAATTCGTAATGCGTGGCATTCTGGGTGGTGGCCGGCTAAATTCGTTCTTTTAGTTCTGTCAATGACATTGCCCTTCTTCTTCCCATCAGAACTCAATCAGTTATATGGTGAATTTGCCCGTATTGGTGCAGGGGTCTTTCTAGCTCTCCAACTTATTAGTGTGATTCAGTTTATAGCTTGGTGGAATAACTACTGGATGCCTGATGGAAAAAGGAATAAAAGCTGCTCCCTTGGATTGTTTATGTCAACGATTTTCTATGTAGCTTCTCTATGTGGAGTGGTAATCTTGTATATATTGTATGTCCCAAGCTCCTCCTGTTCTCTCAACATATTCTTCATCACGTGGACTGCCGTTTTACTTCTTGTAATGATGCTTATATCATTACATTCAAAGGTCAACAGAGGCCTTTTATCTTCAGGCATAATGGCTTCTTATGTTATTTTCCTATGTTGGTCTGCCATCCGAAGTGAACCTGCCGGTGATAGATGCAGCCCACACAAGCAAGAGGATGAACGCCATGATTGGATCACTGTATTGAGCTTCCTTATGGGAATATGCGCTATAGTGATGGCAACATTTTCAACAGGAATTGATTCTGAGTCGTTTCAGTTCCGCAAAGATGAAGTGAAAAAGGAAGATGATATTCCTTATGACTATGGGTTCTTCCACTTGGTATTTTCCTTGGGTGCCATGTACTTTGCAATGCTTTTCATCAACTGGAATCTGAACAGCTCGACTAGAAAGTGGAGTATTGACATTGGATGGGCTAGTACATGGGTGAAGATTATCAATGAGTGGTTTGCGGCCACCATATACATGTGGAACTTGATTTCTCCAGTCCTAAGAGAAGCCAAAATCATGGATGAAGAAGAATCCGAGCATCCGCCAAGCTCTGTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_27342.p1 GENE.R_Transcript_27342~~R_Transcript_27342.p1 ORF type:complete len:421 (+),score=42.39,Serinc|PF03348.11|5.3e-53,Serinc|PF03348.11|9.7e-18 R_Transcript_27342:536-1798(+)
MVNSTTATGMANANTRGGEAVYLEDLSMSPKMNSNETALQRTRSLRARYYYGIIFLLTSLLAWFIRDYIQKVIPENHFHKTCGIGGRDCVQTMGVLRVSFGCFIFFFLMFLKTVKTSKLYEIRNAWHSGWWPAKFVLLVLSMTLPFFFPSELNQLYGEFARIGAGVFLALQLISVIQFIAWWNNYWMPDGKRNKSCSLGLFMSTIFYVASLCGVVILYILYVPSSSCSLNIFFITWTAVLLLVMMLISLHSKVNRGLLSSGIMASYVIFLCWSAIRSEPAGDRCSPHKQEDERHDWITVLSFLMGICAIVMATFSTGIDSESFQFRKDEVKKEDDIPYDYGFFHLVFSLGAMYFAMLFINWNLNSSTRKWSIDIGWASTWVKIINEWFAATIYMWNLISPVLREAKIMDEEESEHPPSSV*

Click here to download the sequence:
Link to NCBI Protein BLAST