Transcript Information: R_Transcript_27347.p1


Annotated TAIR IDAT3G24460.1
Annotated Gene NameSerinc-domain containing serine and sphingolipid biosynthesis protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:8886160-8889717 | Reverse length=409
E-Value1.3E-235
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.492861524181
Replicate 212.597780249779
Replicate 314.488511529566
Condition 2: 8 Hour
Replicate 112.549005785463
Replicate 215.0935952428
Replicate 318.060852567285
Condition 3: 24 Hour
Replicate 121.121182649488
Replicate 217.644207112462
Replicate 323.584001800132


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_27347.p1 GENE.R_Transcript_27347~~R_Transcript_27347.p1 ORF type:complete len:400 (+),score=36.87,Serinc|PF03348.11|5.6e-46,Serinc|PF03348.11|1.8e-19 R_Transcript_27347:583-1782(+)
ATGGAGAGTGCCGCAAACAGCAGCACCAAGGAAAAGTATCCTGGACTCAGAACTGGCTCTTGGTTTAGCCAATTTTGTTATGGCTGCAACCCATGGATGGCTAGATATGTTTACGGACTCATGTTTCTCGTCACAAATTTTTTAGCTTGGGCTATTCGTGATTATGGCCAAAGCGCAATGAAAGAGGTGGAAAGATTGGAAGGATGCACTGGTGGTCTAGAATGCTTAGGCACTGCAGGAGTACTCCGCGTGAGCTTGGGATGTTTTATGTTCTTCTTCACAATGTTCCTTTCTACAGTTGGCACCTCAAAGGTGTATAATTGTAGAGACTCGTGGCATTCAGGGTGGTGGTCTGCAAAAGCTATCATGTTTGTTGGGTTCTTGCTTCTTCCATTCTTGTTACCTTCCTCGATCATCTATCTATATGGTGAGGTGGCACATTTTGGCGCTGGGATCTTTCTCTTAATCCAGCTTGTAAGTGTGATTAGTTTCATTACCTGGCTGAATGATTGCTGCCTGTCAGAGAAATTTGCAGAGAAATGCCGCGTCCATGTGATGTTAATTGCAACGGCAGCATATGTTGTGTGCATAGTGGGGATTATTTTGATGTACATCTGGTATGCACCAGAATCATCTTGTCTCTTGAATATTTTTTACATCACTTGGACATTGGTGCTTCTTCAGCTGATGACCAGTGTCTCCCTACACCCAAAAATCAATGCTGGTTTCTTGGCTCCTGGGCTGATGGGACTTTACCTTGTGTTCATCTGCTGGTGTGCCATCAGAAGTGAACCAGCGGGAACTAGCTGCAACAGAAAGGCGGAAGCGTCAAATAGAACTGACTGGCTTACCATCTTAAGCTTCATTGTAGCATTGCTCACGATAGTCATTGCAACATTTTCGACAGGAATTGATTCTCAATGCTTTCAGTTCTGGAAAAGGGAGACACAGGCAGAAGATGATGTGCCATATGGTTACGGATTCTTCCATTTTGTTTTCGCTACTGGATCAATGTACTTTGCAATGTTGCTGATTGGTTGGAATACTCATCATGCAATGAAGAAGTGGACAATTGATGTGGGTTGGACAAGCACCTGGGTTAGGGTAGTTAATGAATGGTTGGCTGCTTGTGTCTACATTTGGATGCTGGTGGCTCCTGTTATACTAAAGAGTAAACAGGTTGAAGAGCTTCCCTGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_27347.p1 GENE.R_Transcript_27347~~R_Transcript_27347.p1 ORF type:complete len:400 (+),score=36.87,Serinc|PF03348.11|5.6e-46,Serinc|PF03348.11|1.8e-19 R_Transcript_27347:583-1782(+)
MESAANSSTKEKYPGLRTGSWFSQFCYGCNPWMARYVYGLMFLVTNFLAWAIRDYGQSAMKEVERLEGCTGGLECLGTAGVLRVSLGCFMFFFTMFLSTVGTSKVYNCRDSWHSGWWSAKAIMFVGFLLLPFLLPSSIIYLYGEVAHFGAGIFLLIQLVSVISFITWLNDCCLSEKFAEKCRVHVMLIATAAYVVCIVGIILMYIWYAPESSCLLNIFYITWTLVLLQLMTSVSLHPKINAGFLAPGLMGLYLVFICWCAIRSEPAGTSCNRKAEASNRTDWLTILSFIVALLTIVIATFSTGIDSQCFQFWKRETQAEDDVPYGYGFFHFVFATGSMYFAMLLIGWNTHHAMKKWTIDVGWTSTWVRVVNEWLAACVYIWMLVAPVILKSKQVEELPC*

Click here to download the sequence:
Link to NCBI Protein BLAST