Transcript Information: R_Transcript_27349.p1


Annotated TAIR IDAT3G24460.1
Annotated Gene NameSerinc-domain containing serine and sphingolipid biosynthesis protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:8886160-8889717 | Reverse length=409
E-Value5.1E-159
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.634885598425
Replicate 20.8520237850092
Replicate 30.79675609030095
Condition 2: 8 Hour
Replicate 10.70973521586218
Replicate 21.1018405544932
Replicate 31.683627651746
Condition 3: 24 Hour
Replicate 10.93162116286335
Replicate 21.3424940194264
Replicate 31.9032786684259


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_27349.p1 GENE.R_Transcript_27349~~R_Transcript_27349.p1 ORF type:complete len:345 (+),score=22.82,Serinc|PF03348.11|2.9e-45 R_Transcript_27349:581-1615(+)
ATGGAGAGTGCCGCAAACAGCAGCACCAAGGAAAAGTATCCTGGACTCAGAACTGGCTCTTGGTTTAGCCAATTTTGTTATGGCTGCAACCCATGGATGGCTAGATATGTTTACGGACTCATGTTTCTCGTCACAAATTTTTTAGCTTGGGCTATTCGTGATTATGGCCAAAGCGCAATGAAAGAGGTGGAAAGATTGGAAGGATGCACTGGTGGTCTAGAATGCTTAGGCACTGCAGGAGTACTCCGCGTGAGCTTGGGATGTTTTATGTTCTTCTTCACAATGTTCCTTTCTACAGTTGGCACCTCAAAGGTGTATAATTGTAGAGACTCGTGGCATTCAGGGTGGTGGTCTGCAAAAGCTATCATGTTTGTTGGGTTCTTGCTTCTTCCATTCTTGTTACCTTCCTCGATCATCTATCTATATGGTGAGGTGGCACATTTTGGCGCTGGGATCTTTCTCTTAATCCAGCTTGTAAGTGTGATTAGTTTCATTACCTGGCTGAATGATTGCTGCCTGTCAGAGAAATTTGCAGAGAAATGCCGCGTCCATGTGATGTTAATTGCAACGGCAGCATATGTTGTGTGCATAGTGGGGATTATTTTGATGTACATCTGGTATGCACCAGAATCATCTTGTCTCTTGAATATTTTTTACATCACTTGGACATTGGTGCTTCTTCAGCTGATGACCAGTGTCTCCCTACACCCAAAAATCAATGCTGGTTTCTTGGCTCCTGGGCTGATGGGACTTTACCTTGTGTTCATCTGCTGGTGTGCCATCAGAAGTGAACCAGCGGGAACTAGCTGCAACAGAAAGGCGGAAGCGTCAAATAGAACTGACTGGCTTACCGTCATAGTAATTTTTCAGGAACCTTTTGATCTTATATCATCCATTAGGAAGATAGAATACACATTGATTCTGCAATCATTTTGGAACAGGAGAAGCGACTATAATCATCCACACACAGCATTTTCAAAGAGGTTTAATACTTGCATGTTCTCATCACCTAAGGCTTCATGTGCCCTGCAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_27349.p1 GENE.R_Transcript_27349~~R_Transcript_27349.p1 ORF type:complete len:345 (+),score=22.82,Serinc|PF03348.11|2.9e-45 R_Transcript_27349:581-1615(+)
MESAANSSTKEKYPGLRTGSWFSQFCYGCNPWMARYVYGLMFLVTNFLAWAIRDYGQSAMKEVERLEGCTGGLECLGTAGVLRVSLGCFMFFFTMFLSTVGTSKVYNCRDSWHSGWWSAKAIMFVGFLLLPFLLPSSIIYLYGEVAHFGAGIFLLIQLVSVISFITWLNDCCLSEKFAEKCRVHVMLIATAAYVVCIVGIILMYIWYAPESSCLLNIFYITWTLVLLQLMTSVSLHPKINAGFLAPGLMGLYLVFICWCAIRSEPAGTSCNRKAEASNRTDWLTVIVIFQEPFDLISSIRKIEYTLILQSFWNRRSDYNHPHTAFSKRFNTCMFSSPKASCALQ*

Click here to download the sequence:
Link to NCBI Protein BLAST