Transcript Information: R_Transcript_273558.p1


Annotated TAIR IDAT2G17670.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:7674420-7675811 | Forward length=463
E-Value2.7E-186
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.6306757029354
Replicate 24.8160528117867
Replicate 35.9917019869212
Condition 2: 8 Hour
Replicate 17.5379020863753
Replicate 26.5237985250944
Replicate 39.167111198626
Condition 3: 24 Hour
Replicate 19.5619036139532
Replicate 27.7659362290765
Replicate 39.9529602801585


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_273558.p1 GENE.R_Transcript_273558~~R_Transcript_273558.p1 ORF type:complete len:497 (+),score=83.63,PPR_2|PF13041.2|0.12,PPR_2|PF13041.2|13,PPR_2|PF13041.2|0.00026,PPR_2|PF13041.2|3.7e-09,PPR_2|PF13041.2|1.4e-11,PPR_2|PF13041.2|1.8e-14,PPR_2|PF13041.2|7.4e-15,PPR_2|PF13041.2|1.1e-19,PPR_2|PF13041.2|5.6e-07,PPR_2|PF13041.2|0.00042,PPR_1|PF12854.3|1.6e+03,PPR_1|PF12854.3|1.1,PPR_1|PF12854.3|0.14,PPR_1|PF12854.3|6.7e-07,PPR_1|PF12854.3|0.00039,PPR_1|PF12854.3|2.9e-09,PPR_1|PF12854.3|7.1e-12,PPR_1|PF12854.3|1.9e-11,PPR_1|PF12854.3|4.3e-05,PPR|PF01535.16|4.2e+02,PPR|PF01535.16|80,PPR|PF01535.16|7.4,PPR|PF01535.16|0.003,PPR|PF01535.16|1.2e-05,PPR|PF01535.16|1e-06,PPR|PF01535.16|7.9e-08,PPR|PF01535.16|8.5e-06,PPR|PF01535.16|0.17,PPR_3|PF13812.2|1.8,PPR_3|PF13812.2|9.2,PPR_3|PF13812.2|1.8e+02,PPR_3|PF13812.2|3.9,PPR_3|PF13812.2|0.099,PPR_3|PF13812.2|0.017,PPR_3|PF13812.2|0.0085,PPR_3|PF13812.2|5.9e-05,PPR_3|PF13812.2|0.38,PPR_3|PF13812.2|0.3 R_Transcript_273558:89-1492(+)
ATGGGGAAAATGCCAGCATCATTACGTTCTTCACCAAATGCTCTAACCAATCTCCTCAATAAATCTCCTCAAATCCAATCCTCTTCTAAAAAAACCCCCTTTTTCTCCCCAAAACATCGACCCAAAAAACCCCCCAATTCCAAAACCCCTAAACCCTCACTAAACCCTAATTATCAAACCCCCTTCCTCATCACTTCCCCAGCCCTTTCTGATGCCAAATCCCTAATCAATTCCCTCTCTTCAAACCCTATAACCCCAATTGACCTTCAATTCCACAACTCCCTTTTACTATCCTATGCTTCAATTGCTCAATTAGATGACACTTTCTCTCTCTTCACTCACATGCTCAAAACCCTCCCTAATTTCTCCCCTGATCGTTCAAGTTTCCACCTTTTAATCACCCACTCTTGCAATTCCAATTCCCCACTTGAAAATGTCCACCAAGCTGTTGATTTCATGGCTTCTTATGGGTTTTCGCCCGACCCTGCCACTGCTGATGTGGCGGTCCGGGCCCTTTGCCTTGCTGGACATCCTGACGTGGCGGTCGAGCTCGTCGAGGATTTTAACTGTAAGCACAATGTGATCCCTGATAGGTTTACTTACAATTTTCTTGTTAAGCATTTGTGCAAGACTAGGTCTATGAATATGGTTTATGATGTGATTGCTAAATTGAAGGATTTGATTGGGTTGTACCCTGATTTGATAACTTATACTATCTTGATTGATAATGTTTGTAATAGTAGGAATTTACGTGAGGCAACTAGGTTGTTGAGTGAGTTGAGTGAGAATGGGTTTAAGCCTGATTGTTATGTTTATAACACTATTATGAAAGGGTATTGTACTTTGAGCCTTGGTAATGAAGTGCTTAGGGTTTATAAGAAGATGAAAGAGGAAGGTGTGGAACCTGATCTTGTAACTTATAATACTTTGATTTATGGGCTGTCGAAGTCGGGGAAGGTCAAGGAAGCTAAGAAGTATTTGGGTGTTATGGCTGAGATGGGTCATTTTCCTGATGCCGTTACTTATACCTCGTTGATGAATGGGATGTGTCGGGAAGGGGATGTGATGGGGGCAATGAGGTTGCTCAGGGATATGGAAGCTAAGGGTTGTAGCCCAAATGCGTGCACTTATAACACGTTGCTTCATGGGTTTTGTAAGGCAAGGTTGTTGGATAGAGGGATGGAGCTGTATGGCGTGATGAAAGCTGGTGGTATGAATCTTGAGACGGCGGCTTATGCTACTTTTTTGCGGGCGCTATGTAGAGATGGCAGGGTAGCAGATGCTTATGAGGTTTTTGATTATGCCGTTGAGAGTAAAAGTTTGACGGATGTAGCGGCCTATTGTACATTGGAGACTACACTGAAGTGGTTGAAGAAAGCTAGGGAGCAAGGGCTCACTGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_273558.p1 GENE.R_Transcript_273558~~R_Transcript_273558.p1 ORF type:complete len:497 (+),score=83.63,PPR_2|PF13041.2|0.12,PPR_2|PF13041.2|13,PPR_2|PF13041.2|0.00026,PPR_2|PF13041.2|3.7e-09,PPR_2|PF13041.2|1.4e-11,PPR_2|PF13041.2|1.8e-14,PPR_2|PF13041.2|7.4e-15,PPR_2|PF13041.2|1.1e-19,PPR_2|PF13041.2|5.6e-07,PPR_2|PF13041.2|0.00042,PPR_1|PF12854.3|1.6e+03,PPR_1|PF12854.3|1.1,PPR_1|PF12854.3|0.14,PPR_1|PF12854.3|6.7e-07,PPR_1|PF12854.3|0.00039,PPR_1|PF12854.3|2.9e-09,PPR_1|PF12854.3|7.1e-12,PPR_1|PF12854.3|1.9e-11,PPR_1|PF12854.3|4.3e-05,PPR|PF01535.16|4.2e+02,PPR|PF01535.16|80,PPR|PF01535.16|7.4,PPR|PF01535.16|0.003,PPR|PF01535.16|1.2e-05,PPR|PF01535.16|1e-06,PPR|PF01535.16|7.9e-08,PPR|PF01535.16|8.5e-06,PPR|PF01535.16|0.17,PPR_3|PF13812.2|1.8,PPR_3|PF13812.2|9.2,PPR_3|PF13812.2|1.8e+02,PPR_3|PF13812.2|3.9,PPR_3|PF13812.2|0.099,PPR_3|PF13812.2|0.017,PPR_3|PF13812.2|0.0085,PPR_3|PF13812.2|5.9e-05,PPR_3|PF13812.2|0.38,PPR_3|PF13812.2|0.3 R_Transcript_273558:89-1492(+)
MGKMPASLRSSPNALTNLLNKSPQIQSSSKKTPFFSPKHRPKKPPNSKTPKPSLNPNYQTPFLITSPALSDAKSLINSLSSNPITPIDLQFHNSLLLSYASIAQLDDTFSLFTHMLKTLPNFSPDRSSFHLLITHSCNSNSPLENVHQAVDFMASYGFSPDPATADVAVRALCLAGHPDVAVELVEDFNCKHNVIPDRFTYNFLVKHLCKTRSMNMVYDVIAKLKDLIGLYPDLITYTILIDNVCNSRNLREATRLLSELSENGFKPDCYVYNTIMKGYCTLSLGNEVLRVYKKMKEEGVEPDLVTYNTLIYGLSKSGKVKEAKKYLGVMAEMGHFPDAVTYTSLMNGMCREGDVMGAMRLLRDMEAKGCSPNACTYNTLLHGFCKARLLDRGMELYGVMKAGGMNLETAAYATFLRALCRDGRVADAYEVFDYAVESKSLTDVAAYCTLETTLKWLKKAREQGLTV*

Click here to download the sequence:
Link to NCBI Protein BLAST