Transcript Information: R_Transcript_274174.p1


Annotated TAIR IDAT5G16340.1
Annotated Gene NameAMP-dependent synthetase and ligase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:5349255-5350907 | Reverse length=550
E-Value4.3E-282
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.472472202438
Replicate 26.3819690114287
Replicate 310.134995411247
Condition 2: 8 Hour
Replicate 112.242932473623
Replicate 217.333705168257
Replicate 313.515767620216
Condition 3: 24 Hour
Replicate 111.313739533077
Replicate 24.879131013563
Replicate 37.6764431905485


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_274174.p1 GENE.R_Transcript_274174~~R_Transcript_274174.p1 ORF type:complete len:556 (+),score=11.02,AMP-binding|PF00501.24|2.5e-83,AMP-binding_C|PF13193.2|4.9e-25 R_Transcript_274174:70-1737(+)
ATGGAACATCTAAAACCAAGAGAAGCAAACTCACCCCCACTTACCCCCATATCCTTCCTAGACCGAGCAGCCACGGTATACGGTGATTGCAGGTCCATCGTATACAATAATACCGTCTACACGTGGTCTGATACCCACCGTCGATGTCTCCAAATAGCCTCTTCAATCTCATCCCTCGGTATAGGAAGGCGCCACGTGGTGTCCGTTTTAGCACCGAATATTCCAGCCATTTACGAGCTTCACTTTGCTGTGCCTATGAGCGGTGCCATCCTTAATTCCATTAACACCAGGCTCGACACCAGGACTGTTTCCGTGATCCTCCACCACAGCCAATCAAAGCTCGTCTTCGTTGACTATCAGTCTTTGCAACTCCTTAAGGATGCTCTTTCTCTTTTCCCATCCAACTACCCTAAGCCAATCATTGTCCTTATCCAGGAGGAAAATGACCAAATTACCCCTGAAGGTGGAATTTTTGCGACTTACGAGGAGGTGGTCCGCAAAGGAGATCCGGGTTTCCAATGGATCCGCCCTTTGACGGATTGGGATCCCATCGTGTTGAATTATACTTCCGGAACGACGTCGTCTCCCAAGGGTGTGGTCCATTGCCACCGGGGTTCTTTCATCACGAGTGTGAACTCAATCTTGGACTGGGCCCTTCCGGCCCAACCCATTTATTTGTGGACCCTACCCATGTTCCACGCCAATGGCTGGGGTTACACATGGGGTATGGCCGCAGTGGGAGGAGTCAACGTCTGTCTTCGTAAGTTTGACGGAGCCACAATTTATAAGGAGATAGAGCGGCATAAGGTAACCCACATGTGCGGGGCTCCTATTGTGCTCAACATGCTCTCGAACCACCCCAACCCGACCCGTCTAACCCGGCCCGTGAACATCCTCACGGGCGGGGCACCCCCGCCAGCCGCGGTCTTGCACCGGACGGAGGCGCTTGGGTTCGTGGTGAGCCACGGGTACGGGTTGACGGAAACGGGCGGGCTAGTGGTGTCGTGTGCTTGGAAGCCTCATTGGGACAAGTTCCCCGCCGGTGAACGGGCTAAGCTCAAAGCCCGTCAAGGGATACGGACCATCGGCACAACTGAGGTGGACGTGATCAATCCCGACACCGGAAAATCCGTGAAGCGTGACGGACTTTCCGTTGGGGAAATCGTCCTCCGAGGATGGTCCCTAATGTTGGGTTACCTTAAGGACCCTCAAGGGACCATTAAATGCATGGGAAAAGATGGTTGGTTTAGAACAGGAGATGTTGGGGTCATGCATCCGGACGGATACTTAGAAATCAAGGATCGGTCCAAGGACATCATAATAAGCGGGGGAGAAAACATTAGTAGTGTGGAGGTCGAATCCATATTGTACACTCATCCGGCAGTCAATGAGGCGGCGGTGGTGGCAAGGCCTGACGAGTATTGGGGAGAAACACCATGTGCATTTGTGAGCCTGAAGCAAGGATTAAAAGGAAAAACACCAACTGAGAAAGACATAATAGAATATTGTAGACAGAAATTGCCGCGCTATATGGTGCCAAAAACGGTGGCTTTCAAAGATGAGTTGCCTAAAACTTCCACAGGGAAGATTCAAAAGTTTGTGCTTAGGGATATGGCCAAGAGATTAGGTCCAATATCAGCACCATCAGCAACCACAAGTCGTTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_274174.p1 GENE.R_Transcript_274174~~R_Transcript_274174.p1 ORF type:complete len:556 (+),score=11.02,AMP-binding|PF00501.24|2.5e-83,AMP-binding_C|PF13193.2|4.9e-25 R_Transcript_274174:70-1737(+)
MEHLKPREANSPPLTPISFLDRAATVYGDCRSIVYNNTVYTWSDTHRRCLQIASSISSLGIGRRHVVSVLAPNIPAIYELHFAVPMSGAILNSINTRLDTRTVSVILHHSQSKLVFVDYQSLQLLKDALSLFPSNYPKPIIVLIQEENDQITPEGGIFATYEEVVRKGDPGFQWIRPLTDWDPIVLNYTSGTTSSPKGVVHCHRGSFITSVNSILDWALPAQPIYLWTLPMFHANGWGYTWGMAAVGGVNVCLRKFDGATIYKEIERHKVTHMCGAPIVLNMLSNHPNPTRLTRPVNILTGGAPPPAAVLHRTEALGFVVSHGYGLTETGGLVVSCAWKPHWDKFPAGERAKLKARQGIRTIGTTEVDVINPDTGKSVKRDGLSVGEIVLRGWSLMLGYLKDPQGTIKCMGKDGWFRTGDVGVMHPDGYLEIKDRSKDIIISGGENISSVEVESILYTHPAVNEAAVVARPDEYWGETPCAFVSLKQGLKGKTPTEKDIIEYCRQKLPRYMVPKTVAFKDELPKTSTGKIQKFVLRDMAKRLGPISAPSATTSRL*

Click here to download the sequence:
Link to NCBI Protein BLAST