Transcript Information: R_Transcript_274625.p2


Annotated TAIR IDAT5G42765.1
Annotated Gene NameINVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Twin-arginine translocation pathway, signal sequence (InterPro:IPR006311); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17150505-17151641 | Reverse length=229
E-Value8E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5823568228887
Replicate 22.7471794937212
Replicate 34.2816331955425
Condition 2: 8 Hour
Replicate 10.68651957796015
Replicate 25.8514457154504
Replicate 35.7678015055435
Condition 3: 24 Hour
Replicate 13.8620610289596
Replicate 23.5041065527085
Replicate 36.7504135950244


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_274625.p2 GENE.R_Transcript_274625~~R_Transcript_274625.p2 ORF type:5prime_partial len:107 (-),score=30.61 R_Transcript_274625:76-396(-)
GAGAGTTTGTGTTTTCTTCCTAATAGATTTATAGAAAAAGAAGATGAAGGAGGAAAGGATAAGAGTAAAGGACAATCACATGGACCTACGGTTTGCACATTCAAACTGATTGTGAAGAATGCATCTTCATTACTTGATGATAGTGATACAAAGAAGATGGCAGCTGAAGCCATGCTGAGTGAGCTTACAAGGTCATTCGCCATTCTCATTGGTTTGGCCAAGGAAGCAAAGATTGAAATTGTGTCCGATAGAGAGAAGATTGCAGATGCTTTGATGGACGCATTATCTTCCCTTGAAAAATTTGAACAAGGGATGCATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_274625.p2 GENE.R_Transcript_274625~~R_Transcript_274625.p2 ORF type:5prime_partial len:107 (-),score=30.61 R_Transcript_274625:76-396(-)
ESLCFLPNRFIEKEDEGGKDKSKGQSHGPTVCTFKLIVKNASSLLDDSDTKKMAAEAMLSELTRSFAILIGLAKEAKIEIVSDREKIADALMDALSSLEKFEQGMH*

Click here to download the sequence:
Link to NCBI Protein BLAST