Transcript Information: R_Transcript_274629.p1


Annotated TAIR IDAT5G42765.1
Annotated Gene NameINVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Twin-arginine translocation pathway, signal sequence (InterPro:IPR006311); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17150505-17151641 | Reverse length=229
E-Value2E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.20281067727465
Replicate 20.23329222684776
Replicate 30.25451930662392
Condition 2: 8 Hour
Replicate 10.544130332161
Replicate 20.49690848535968
Replicate 30
Condition 3: 24 Hour
Replicate 10.25508674697449
Replicate 20.24505843211753
Replicate 30.48639343748661


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_274629.p1 GENE.R_Transcript_274629~~R_Transcript_274629.p1 ORF type:5prime_partial len:90 (+),score=4.79 R_Transcript_274629:1-270(+)
CTCCTTTATGCTCCCCCTCCATTCCCATTTCTCTCAAATCCACAACTACTGCTCTACTATATCTACTTGCCGTATTCCTATTTCTTCTGGGATTTCTTGTCCTCAAAGTCGGAGACATGTTCTACTATTACCGGTTCTCATCCCTTCATTGCTCTTTCACCTTCAGCCTCAGCCTGCCTTTGCATTCAAAAACATCGGAATCTCAGGACCGAAAGATTGGCTCAAGGACTAGAAGAAGAAGTCTATCAAGTATCTTTTAGCCCCAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_274629.p1 GENE.R_Transcript_274629~~R_Transcript_274629.p1 ORF type:5prime_partial len:90 (+),score=4.79 R_Transcript_274629:1-270(+)
LLYAPPPFPFLSNPQLLLYYIYLPYSYFFWDFLSSKSETCSTITGSHPFIALSPSASACLCIQKHRNLRTERLAQGLEEEVYQVSFSPN*

Click here to download the sequence:
Link to NCBI Protein BLAST