Transcript Information: R_Transcript_27482.p1


Annotated TAIR IDAT1G09310.1
Annotated Gene NameProtein of unknown function, DUF538
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:3009109-3009648 | Forward length=179
E-Value3.8E-57
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 198.950262017686
Replicate 2120.59059383834
Replicate 3112.72526132843
Condition 2: 8 Hour
Replicate 1132.09479774172
Replicate 2158.43861672998
Replicate 3163.84216954718
Condition 3: 24 Hour
Replicate 1139.25722542068
Replicate 2172.95966182611
Replicate 3135.0701776073


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_27482.p1 GENE.R_Transcript_27482~~R_Transcript_27482.p1 ORF type:complete len:152 (+),score=26.03,DUF538|PF04398.8|1.7e-32 R_Transcript_27482:167-622(+)
ATGTCGGCCCAATTCATCGAAAATCACCGTGAAAACGCTGAAGTCTACAAAGGTGCAGAGATCTGCAAGCAAAAGTCAAAAGAACTTCTTGCTGAGATCAACATGCCTCTTGGGCTTCTCCCCATGGACGATATAGAAGAAGTTGGATACAACAGGTCAACCGGGTTCGTTTGGCTGACCCAGAAAAAACCGATCCAGCACCGATTCACCAAGATCGGAAAGATGGTATCTTATGATACCCACGTCACGGCTTTTGTTGAGAACCGTCGGATGAAGAAGCTTCATGGTGTCAAAGCTAAGGAGCTCCTTATCTGGATTACTATTAATGAGATCTACATCGATGACCCTGCTTCTGGTAAAATTACCTTTGGTACCCCTACTGGGATTTCACGTACCTTCCCGATTTCTGCTTTTGAGGAGGAAGAGGAGGTGAAGAAGGAAAATAGCCCCAACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_27482.p1 GENE.R_Transcript_27482~~R_Transcript_27482.p1 ORF type:complete len:152 (+),score=26.03,DUF538|PF04398.8|1.7e-32 R_Transcript_27482:167-622(+)
MSAQFIENHRENAEVYKGAEICKQKSKELLAEINMPLGLLPMDDIEEVGYNRSTGFVWLTQKKPIQHRFTKIGKMVSYDTHVTAFVENRRMKKLHGVKAKELLIWITINEIYIDDPASGKITFGTPTGISRTFPISAFEEEEEVKKENSPN*

Click here to download the sequence:
Link to NCBI Protein BLAST