Transcript Information: R_Transcript_27523.p1


Annotated TAIR IDAT2G26260.1
Annotated Gene Name3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2
Annotated Gene Symbol(s)AT3BETAHSD/D2, 3BETAHSD/D2
Annotation TypeOrtholog
Chromosome Positionchr2:11178237-11182872 | Forward length=564
E-Value1.2E-287
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.975200416956
Replicate 214.727620795605
Replicate 317.592044880498
Condition 2: 8 Hour
Replicate 18.8078650889371
Replicate 210.335875239541
Replicate 312.666951296241
Condition 3: 24 Hour
Replicate 119.530652551626
Replicate 215.391079945223
Replicate 316.809442268535


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_27523.p1 GENE.R_Transcript_27523~~R_Transcript_27523.p1 ORF type:complete len:556 (+),score=113.50,3Beta_HSD|PF01073.15|3.2e-78,Reticulon|PF02453.13|3.2e-37,Epimerase|PF01370.17|1.7e-35,GDP_Man_Dehyd|PF16363.1|1.8e-19,NAD_binding_4|PF07993.8|1e-16,RmlD_sub_bind|PF04321.13|2.6e-10,Polysacc_synt_2|PF02719.11|3.3e-08,Polysacc_synt_2|PF02719.11|5.1e+03,NmrA|PF05368.9|4.8e-07 R_Transcript_27523:133-1800(+)
ATGGCAAGTCAAGAGAGATGGTGCGTTGTTACTGGGGGAAGAGGTTTCGCAGCCAGGCATTTGGTCGAAATGCTGATTCGATATGAGATGTTTTGTGTGAGAATAGCTGATTTGCAGCCTAATATTAAGCTTGAGCCTTATGAAGATGAAGGTACTCTTGGCAAAGCATTGCAATCTGGCCGCGCTCATTATGTATCTGCTGATCTCAGAGATAAGGCTGAAGTACTTAAAGCTTGTCAAGGAGCTGAGGTTGTCTTTCATATGGCAGCTCCAGATTCTTCCATCAATAATTACAACCTCCAGCGTTCTGTCAATGTTGAAGGAACCAAAAATGTCATTGAGGCTTGTGTTGAGGCGCAAGTAAAGAGGTTAATTTATACTAGCTCTCCTAGTGTGGTCTTTGATGGGGTTCATGGGATCATCGATGGGGATGAGTCACTGTCTTATCCCGTTAAGCATAATGATTTCTATTCAGCCACGAAAGCTGAAGGAGAAGCATTGGTCTTGAAGGCAAATGATGAAAATGGGCTCCTCACATGCTGCATACGTCCGAGCAGTATATTTGGCCCTGGTGATAGATTACTAGTTCCATCTTTAGTTAATGCTGCAAGGGCTGGGAAGTCTAAGTTCATCATAGGAGATGGCAATAACATGTATGATTTCACCTATGTTGAGAATGTTGCTCACGCCCACATATGTGCTGAACGAGCTCTAGCATCTAAAGGAGCAGTTGCAGAGAAGGCTTCGGGCCAGGCATACTTCATTACAAATATGGAGCCAATCAAATTTTGGGAATTTATGTCCCTTATACTCGAGGGTCTAGGCTATGAGAGGCCAAGAATAAAGATTCCTGCAGTTCTGATGATGCCTATTGCTCATTTGATCGAGTTCATGTATAAGCTACTAGCTCCATATGGTATGAAAGTTCCACAGTTGACACCTTCAAGAATCAGACTCCTTTCTTGCAGCAGAACTTTTAATTGCTCAAAAGCGAAGGATCGACTTGGTTACACACCCATTGTGTCTCTTCAGGAGGGTATTGAGAGAACAATAGAGTCTTACTCACATTTGAGAGCAGAACAACAACCTAAAAGAGTTGGACAATCTAAAGCTCACAGATATCTTGGAGGTGGAAGAGTTGCTGATATACTTCTCTGGAGGGACAAAAAGCAAACCTTTGCTGCTGCACTGATTTTGCTTGCATTTTGCTACAACTTCATTGCTTCAGGATACACTATGGTTGCAACAATTTCCAAACTCATCTTGATGGCGGCAGTTTTCCTTTACGTTCATGCCAATTTCCCTGAAAGAATATTTGGGTGTTCTGTTGAGAAAGTTCCTGTGACAGCCTTTCACTGCTCAGAAGAGAACTCAAGAAGAGCAGCTCATTCAGCTGTCTCACTGTGGAATAGTGCGGTTCGTGTTTTGAAGTCCCTTTGCCAGGGCAACGACTGGACGTTGTTTCTTAAGGTTATTGTCACTCTATTGATTCTCAGTTTCGTTGGAGCCTTGTCTCTTCAGCGTTTATTTTTGGCTGGGATCCTGACCTCATTTGTTGCATTCTATATCTACGAAAAGAAAGAAGAAGAAATTGATCACCTTCTTTCAAAAGCTACCAGCATTCCGGGCCAATTGAAATCCAACATAATGAAGAAAAAGAATCAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_27523.p1 GENE.R_Transcript_27523~~R_Transcript_27523.p1 ORF type:complete len:556 (+),score=113.50,3Beta_HSD|PF01073.15|3.2e-78,Reticulon|PF02453.13|3.2e-37,Epimerase|PF01370.17|1.7e-35,GDP_Man_Dehyd|PF16363.1|1.8e-19,NAD_binding_4|PF07993.8|1e-16,RmlD_sub_bind|PF04321.13|2.6e-10,Polysacc_synt_2|PF02719.11|3.3e-08,Polysacc_synt_2|PF02719.11|5.1e+03,NmrA|PF05368.9|4.8e-07 R_Transcript_27523:133-1800(+)
MASQERWCVVTGGRGFAARHLVEMLIRYEMFCVRIADLQPNIKLEPYEDEGTLGKALQSGRAHYVSADLRDKAEVLKACQGAEVVFHMAAPDSSINNYNLQRSVNVEGTKNVIEACVEAQVKRLIYTSSPSVVFDGVHGIIDGDESLSYPVKHNDFYSATKAEGEALVLKANDENGLLTCCIRPSSIFGPGDRLLVPSLVNAARAGKSKFIIGDGNNMYDFTYVENVAHAHICAERALASKGAVAEKASGQAYFITNMEPIKFWEFMSLILEGLGYERPRIKIPAVLMMPIAHLIEFMYKLLAPYGMKVPQLTPSRIRLLSCSRTFNCSKAKDRLGYTPIVSLQEGIERTIESYSHLRAEQQPKRVGQSKAHRYLGGGRVADILLWRDKKQTFAAALILLAFCYNFIASGYTMVATISKLILMAAVFLYVHANFPERIFGCSVEKVPVTAFHCSEENSRRAAHSAVSLWNSAVRVLKSLCQGNDWTLFLKVIVTLLILSFVGALSLQRLFLAGILTSFVAFYIYEKKEEEIDHLLSKATSIPGQLKSNIMKKKNQ*

Click here to download the sequence:
Link to NCBI Protein BLAST