Transcript Information: R_Transcript_2754.p1


Annotated TAIR IDAT1G79330.1
Annotated Gene Namemetacaspase 5
Annotated Gene Symbol(s)AMC6, ATMCP2B, ATMC5, MC5
Annotation TypeOrtholog
Chromosome Positionchr1:29838722-29840137 | Forward length=410
E-Value1.4E-181
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 133.172047762457
Replicate 234.083035607278
Replicate 331.483689572794
Condition 2: 8 Hour
Replicate 131.306128699674
Replicate 238.084972268321
Replicate 336.593315474433
Condition 3: 24 Hour
Replicate 142.456218845754
Replicate 244.060163308802
Replicate 341.226841019841


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_2754.p1 GENE.R_Transcript_2754~~R_Transcript_2754.p1 ORF type:complete len:438 (+),score=94.67,Peptidase_C14|PF00656.18|2.4e-74 R_Transcript_2754:61-1314(+)
ATGGGAAAGAAGGCGGTGTTGATAGGATGCAACTACCCAGGCACAAAGGCAGAGCTGAAAGGATGCATCAACGACGTGAAGAGGATGAACCGGTGTCTGGTGGATCGGTTCGGATTTGATGAACAAGATATAGAAATTCTGATCGATACTGACTCGTCCTACACTCAGCCGACCGGCAAGAACATCCGTCGAGCCCTCCATGATCTGATCCGGTCGGCTGAACCGGGGGATTACCTCTTCGTTCATTACAGCGGTCATGGCACTCGTCTCCCTGCCGAGACTGGCGAGCCTGATGACACTGGCTTTGATGAATGCATCGTTCCTTCTGACATGAATCTCATCACTGATGATGATTTCAAGGAACTGGTGTGCCATGTTCCTGATGAGAGCTGGCTCACAATCGTGTCAGATTCGTGCCATAGTGGTGGCTTAATAAGTGACGTGAAAGAGCAGATTGGGGATAGTACAAAGGCAAACCAAGATGACGATAGTGGCAGCTCCGGTTTTGGGTTTACAAGCTTCTTGAAGCAGGCTATGAAGGACAAAGTCAGAGACACATTTGAGTCTCGTGGCGTTCACGTCTCTCATCATCACAGCCAAGGAGAACATGATAATTACAAGGTAGTCGAGGAAGACCATGAAGATCGTGGCTATGTCAAGAGTCGGTCCCTCCCTCTTTCCACTTTGATCGAAATCCTGAAGCAAAAAACTGGCAAGGATGACATTGATGTCAGCAAAATTAGGCCTGCCTTGTTCGACATCTTTGGGGAGGACTCAAGCCCTAAGGTTAAGAAGTTTATGAAGCTTATAGTTGAAAAGCTACAAGGAAGCTCCCAAGGTGAAGGTGAGGGAGGCGGGTTCATGGGAATAGTGGGGAACCTTGCTCAGGAATTTCTAAAGCAGAAGATTGACGAAGGTAATGAAGATTATGCTAAACCTGCTATGGAAACTCACATTGAGAGGAAACAAGAAGTGTATGCTGGGATTAGCAAGGAACTTCCGAAGAATGGAACGCTGCTTAGCGGATGCCAAACAGATCAAACATCTGCAGATGCTAGCCCTGGAGGCAACACTCGTGAAGCTTATGGAGCTTTCAGCAATGCAATTCAGGCGGTTCTTGCTGAATCAGAAGGGAGAATTTCTAATGAAGAACTTGTCATGAGAGCAAGGAAGATGCTAAAACACCAAGGTTTCACTCAGCAACCTGGGCTTTACTGCAGTGACAAAAATCTTGATGCTCCCTTTGTTTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_2754.p1 GENE.R_Transcript_2754~~R_Transcript_2754.p1 ORF type:complete len:438 (+),score=94.67,Peptidase_C14|PF00656.18|2.4e-74 R_Transcript_2754:61-1314(+)
MGKKAVLIGCNYPGTKAELKGCINDVKRMNRCLVDRFGFDEQDIEILIDTDSSYTQPTGKNIRRALHDLIRSAEPGDYLFVHYSGHGTRLPAETGEPDDTGFDECIVPSDMNLITDDDFKELVCHVPDESWLTIVSDSCHSGGLISDVKEQIGDSTKANQDDDSGSSGFGFTSFLKQAMKDKVRDTFESRGVHVSHHHSQGEHDNYKVVEEDHEDRGYVKSRSLPLSTLIEILKQKTGKDDIDVSKIRPALFDIFGEDSSPKVKKFMKLIVEKLQGSSQGEGEGGGFMGIVGNLAQEFLKQKIDEGNEDYAKPAMETHIERKQEVYAGISKELPKNGTLLSGCQTDQTSADASPGGNTREAYGAFSNAIQAVLAESEGRISNEELVMRARKMLKHQGFTQQPGLYCSDKNLDAPFVC*

Click here to download the sequence:
Link to NCBI Protein BLAST