Transcript Information: R_Transcript_275445.p1


Annotated TAIR IDAT5G62140.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 60 Blast hits to 60 proteins in 24 species: Archae - 0; Bacteria - 14; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:24954563-24955376 | Reverse length=241
E-Value1.6E-69
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.85049638857112
Replicate 20.37627778523832
Replicate 30.41051501068374
Condition 2: 8 Hour
Replicate 10.17552591360032
Replicate 20.080146529896723
Replicate 30.39035721764273
Condition 3: 24 Hour
Replicate 10.3291441896445
Replicate 20.5533577499428
Replicate 30.86295609876656


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_275445.p1 GENE.R_Transcript_275445~~R_Transcript_275445.p1 ORF type:5prime_partial len:279 (+),score=44.29 R_Transcript_275445:2-838(+)
TTAGTTTTGTCACATGAATTTGCCTCGCTACTTCTTCAATCCCCCATTATAATTCACAAAAACACTAGAAGTTGCTCATTCAAAATGAGACTTCATACTAACTTCTCTGTAAGACCTCTATTTTCATGCTCAATAATTCCTACCAAAACACCAACCTTAATCTCATACTCTTCATCACAACCCAGACTGCTTGTAACGCAAGCGCTAGCCCTATCTTCATCTTCCCCTAGCCAAAAATCCGAGGAAATTTTCAGTTCTTCGACCACCAAAGAAACTCAAGAATTGAAGAAAACAAGTTCTTACAATATTGAGTTCAAAACAAAGGGAGGTTGCAAGCTTGGGATCGCAAGATACCCCGATTTGGAATATAATGCAAATGGTGGGCTTGGTACAGGAAGTGGAGTAGATGACCAGAATGGGGAGATTTTAGTTAATTTTGATGTGGAAAAGCTTTACATTCCACCATTAACAAGTGAGACAACCAAGTTCTTGGGGTTGCCATTGCCACCATTTTTGAGGATTGATATTGTGCCTGAAATGTTTCAGGGAAGCATTGATAAAGAGTCTGGCAAGGTTGATCTGCAGTTCAAGGCCAAGTTCTGGTTTTCGGTAGGCGTACTCTACAAGGCGCCACCATTGTTGGTGGTAACAGTTTTGACATCCGAAGACTCGGAGGGGAAGCTGAGGAAGGGAAGAGGAGAGAGGATGGACAAAGCTGGTAACTGCAAGTTAGTAGGGGTAGCAACTGTCGATCCAATTGATGATGTCTTCATGAATACCTTTCTTGGCCTTCCTACTGAATGTCTCGCTGTTCTTAATGCCACTATCTCAGTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_275445.p1 GENE.R_Transcript_275445~~R_Transcript_275445.p1 ORF type:5prime_partial len:279 (+),score=44.29 R_Transcript_275445:2-838(+)
LVLSHEFASLLLQSPIIIHKNTRSCSFKMRLHTNFSVRPLFSCSIIPTKTPTLISYSSSQPRLLVTQALALSSSSPSQKSEEIFSSSTTKETQELKKTSSYNIEFKTKGGCKLGIARYPDLEYNANGGLGTGSGVDDQNGEILVNFDVEKLYIPPLTSETTKFLGLPLPPFLRIDIVPEMFQGSIDKESGKVDLQFKAKFWFSVGVLYKAPPLLVVTVLTSEDSEGKLRKGRGERMDKAGNCKLVGVATVDPIDDVFMNTFLGLPTECLAVLNATISV*

Click here to download the sequence:
Link to NCBI Protein BLAST