Transcript Information: R_Transcript_275461.p1


Annotated TAIR IDAT5G12180.1
Annotated Gene Namecalcium-dependent protein kinase 17
Annotated Gene Symbol(s)CPK17
Annotation TypeOrtholog
Chromosome Positionchr5:3937136-3939323 | Forward length=528
E-Value1.8e-315
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.71247617109497
Replicate 20.54637212979214
Replicate 30.42577579175004
Condition 2: 8 Hour
Replicate 10.40961484112492
Replicate 20.37406679659976
Replicate 30.23617337238422
Condition 3: 24 Hour
Replicate 10.42672504140714
Replicate 20.24596943000644
Replicate 30.61025198941164


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_275461.p1 GENE.R_Transcript_275461~~R_Transcript_275461.p1 ORF type:complete len:538 (+),score=111.12,Pkinase|PF00069.21|5.6e-75,Pkinase|PF00069.21|8.3e+02,Pkinase|PF00069.21|3e+03,EF-hand_1|PF00036.28|6.1e-07,EF-hand_1|PF00036.28|2.7e-05,EF-hand_1|PF00036.28|1.8e-06,EF-hand_1|PF00036.28|9e-09,EF-hand_7|PF13499.2|9.3e-16,EF-hand_7|PF13499.2|2.6e-12,Pkinase_Tyr|PF07714.13|3.5e-29,EF-hand_6|PF13405.2|3.2e-06,EF-hand_6|PF13405.2|0.44,EF-hand_6|PF13405.2|2.2e-07,EF-hand_6|PF13405.2|0.0012,EF-hand_5|PF13202.2|2.2e-05,EF-hand_5|PF13202.2|0.057,EF-hand_5|PF13202.2|0.0012,EF-hand_5|PF13202.2|0.0032,EF-hand_8|PF13833.2|0.0041,EF-hand_8|PF13833.2|4.2e-07,EF-hand_8|PF13833.2|0.38,EF-hand_8|PF13833.2|2e-06,EF-hand_9|PF14658.2|0.00022,EF-hand_9|PF14658.2|0.00036,Kinase-like|PF14531.2|9.9,Kinase-like|PF14531.2|0.00019,EF-hand_4|PF12763.3|0.025,EF-hand_4|PF12763.3|0.14 R_Transcript_275461:267-1880(+)
ATGGGCAACTGTTGCCCCCGTGGCAACGCAGAGCCAACCGGGTCACCAAACAACTCCCAAAAGGGTGGAAATCCCAGCACCGCTGGTGGTGGTGACAATGCCAATCCAAGCACCCATACACCGGATAATTCCAATAGGCCTACACCTCCTGCGGCTTCTCCTTCACGTACCCCTAACAAACCTGCCAAGCCGGCCCAAATAGGTCCTGTCCTGGGCCGCCCTATGGAGGATGTCAAGTCCATGTACAGTTTTGGCAAGGAGCTTGGCCGTGGTCAATTTGGGGTTACCCATTTGGTCACCCACAAACAATCTGGCGAGCAATTCGCCTGTAAGACCATTGCTAAGAGGAAGCTTGTTAATAAGGAGGATATCGAGGATGTCAGGAGAGAAGTCCAGATTATGCATCACCTTACTGGCCAGCCCAACATTGTTGAGCTTAAGGGCGCTTTTGAGGATAAGCATTCCGTGCATCTAGTGATGGAGCTTTGTGCTGGTGGGGAGCTCTTTGATCGTATCATCGCTAAGGGTCATTACACTGAACGGGCTGCAGCTTCTTTGCTTAGGACCATTGTTCAAATCGTGCATACGTGCCACTCCATGGGGGTTATTCATCGTGATCTCAAGCCTGAGAATTTCCTTCTCTTGAATAAGGATGAGAATTCCCCCCTCAAGGCCACCGATTTTGGTCTTTCTGTTTTCTACAAGACAGGAGATTCATTCAAGGACATTGTTGGGAGTGCGTACTACATTGCACCAGAAGTCTTGAAGAGAAAATATGGGCCAGAGGTTGATATATGGAGTGTTGGGGTCATGTTATACATTCTTTTATCTGGGGTCCCGCCCTTCTGGGCAGAAACGGAGCATGGTATATTCAATGCAATCTTGAGGGGACACATTGATTTCACAAGCGATCCATGGCCTTCCATTTCAGCACAAGCAAAGGACCTTGTGAGGAAGATGTTGAATTCTGACCCAAAACAAAGGCTTACGGCTTACCAAGTTCTCAATCATCCTTGGATCAAGGAGGATGGAGAAGCACCCGATGTTCCTCTTGACAACGCAGTCCTTGGCAGGTTGAAACAGTTCCGAGCAATGAACAAGTTCAAGAAAGTTGCTCTAAGGGTCATTGCCGGATGTCTATCGGAGGAAGAAATCATGGGACTAAAAGAGATGTTTAAGAGCATGGACACTGACAACAGTGGAACTATAACTATGGAAGAGCTTAAGCAAGGCCTCCAACAGCAAGGAACTAAGCTATCCGAGACTGAAGCACAGCAGTTGATGGAAGATGCGGATTCAGATGGAAATGGACTAATAGACTACGAGGAGTTCATCACAGCAACCATGCACATGAACAGAATGGACAGAGAAGAACATCTGTACACCGCCTTCCAGTACTTTGACAAAGACAATAGCGGGTACATCACAATTGGGGAGCTAAAGCAGGCATTGCGTGAGTATGGAATGCACGATGGGAGGGACATTAAGGAGATAATCTCTGAAGTTGATGCTGATAATGATGGGCGGATCAACTATGATGAATTCGTAGCAATGATGAGGAAAGGAAATCCCGAGGCAGGAAACTTGAAGAAGCGGCGCAGTTTGGCTGTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_275461.p1 GENE.R_Transcript_275461~~R_Transcript_275461.p1 ORF type:complete len:538 (+),score=111.12,Pkinase|PF00069.21|5.6e-75,Pkinase|PF00069.21|8.3e+02,Pkinase|PF00069.21|3e+03,EF-hand_1|PF00036.28|6.1e-07,EF-hand_1|PF00036.28|2.7e-05,EF-hand_1|PF00036.28|1.8e-06,EF-hand_1|PF00036.28|9e-09,EF-hand_7|PF13499.2|9.3e-16,EF-hand_7|PF13499.2|2.6e-12,Pkinase_Tyr|PF07714.13|3.5e-29,EF-hand_6|PF13405.2|3.2e-06,EF-hand_6|PF13405.2|0.44,EF-hand_6|PF13405.2|2.2e-07,EF-hand_6|PF13405.2|0.0012,EF-hand_5|PF13202.2|2.2e-05,EF-hand_5|PF13202.2|0.057,EF-hand_5|PF13202.2|0.0012,EF-hand_5|PF13202.2|0.0032,EF-hand_8|PF13833.2|0.0041,EF-hand_8|PF13833.2|4.2e-07,EF-hand_8|PF13833.2|0.38,EF-hand_8|PF13833.2|2e-06,EF-hand_9|PF14658.2|0.00022,EF-hand_9|PF14658.2|0.00036,Kinase-like|PF14531.2|9.9,Kinase-like|PF14531.2|0.00019,EF-hand_4|PF12763.3|0.025,EF-hand_4|PF12763.3|0.14 R_Transcript_275461:267-1880(+)
MGNCCPRGNAEPTGSPNNSQKGGNPSTAGGGDNANPSTHTPDNSNRPTPPAASPSRTPNKPAKPAQIGPVLGRPMEDVKSMYSFGKELGRGQFGVTHLVTHKQSGEQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVELKGAFEDKHSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIVHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKTGDSFKDIVGSAYYIAPEVLKRKYGPEVDIWSVGVMLYILLSGVPPFWAETEHGIFNAILRGHIDFTSDPWPSISAQAKDLVRKMLNSDPKQRLTAYQVLNHPWIKEDGEAPDVPLDNAVLGRLKQFRAMNKFKKVALRVIAGCLSEEEIMGLKEMFKSMDTDNSGTITMEELKQGLQQQGTKLSETEAQQLMEDADSDGNGLIDYEEFITATMHMNRMDREEHLYTAFQYFDKDNSGYITIGELKQALREYGMHDGRDIKEIISEVDADNDGRINYDEFVAMMRKGNPEAGNLKKRRSLAV*

Click here to download the sequence:
Link to NCBI Protein BLAST