Transcript Information: R_Transcript_27550.p1


Annotated TAIR ID
Annotated Gene Name
Annotated Gene Symbol(s)
Annotation Type
Chromosome Position
E-Value
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.9727283267405
Replicate 21.9087545832998
Replicate 32.6568943293343
Condition 2: 8 Hour
Replicate 12.0724713278233
Replicate 21.0514521241937
Replicate 31.0811304131265
Condition 3: 24 Hour
Replicate 11.0075526683005
Replicate 21.2444973668664
Replicate 30.54890795453034


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_27550.p1 GENE.R_Transcript_27550~~R_Transcript_27550.p1 ORF type:complete len:319 (+),score=45.92,Retrotrans_gag|PF03732.13|4.8e-07 R_Transcript_27550:1368-2324(+)
ATGGATCCTAATGTAGAGAAAGTATTAAAGATCCTGAAAGACTCCAATTTATTCAACAATCACATTCACCATGAATCTTGTGATCCAGAGATCAAGGGTCGCATCCCAAATAAGGTGGTATTAAATGACCTCCCAAAATTCAAGCGGACACAAAATTTCCGCAGCCATTTACGAAGCTTCAAGACGGCTATGGTGGTCAAAGGGCTAGGCAAAGAGATTTACAGTGAATTATTTCCTCTTACACTTGAAGGAGCTGCGAACGATTGGTATGGGTCCCTCAAGCACTCTAAGACTAAAGACTGGGACATTCTCGAAGGTGAGTTTATCTCCCAGTACAACTATAACACCGAATTTCCCATGACTGTAAGGGAGCTTGAGGTAACTAAGCAAGACGACAAGAAAAGCTTTACTACCTTCTTGGCTCGCTGGAGGGAAAAGGCCGCACTCATCATCAACCGTCCTCATGAAAGTGAGCAAGTAAGAATGTTTGTGAAGAACTTGCGATCTACTTATAGGGATCACATTCGATTCATGCCATTGAACACCTTCGCTGAAGTATATGAAGTCGGCATTCGAATCGAGGAGTCCCTTCAGGAGAAGAAGGCCACTATCAAGTTCAATAACTACCATGACAAAAAGCAAGGCAATGGAGGCTCGACTTCCATGAAGGAAGTCAATGCACTCAACTCTTCCAGCAAGCCTCAAAGAGTGTTCTCCAATTTAGGGATGACACTTTCACAAGCTTTGGACAAACTCCAAAAGAATGGCCATTTGGAACCCCTTGAGCCACGTGATCCTCCCCCTCCTGAAAAAAGGGGTCGAAGTTTTGATGAAAACATGTACTGCAAGTTCCATCAGGTAATTGGGCATAAGACGGATAATTGCGCTAGATTGAGGCATGAGATCCAAGATCTCATTGATGAAGGAAAAGTTGTTCCACCCAGTGAAGGCCATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_27550.p1 GENE.R_Transcript_27550~~R_Transcript_27550.p1 ORF type:complete len:319 (+),score=45.92,Retrotrans_gag|PF03732.13|4.8e-07 R_Transcript_27550:1368-2324(+)
MDPNVEKVLKILKDSNLFNNHIHHESCDPEIKGRIPNKVVLNDLPKFKRTQNFRSHLRSFKTAMVVKGLGKEIYSELFPLTLEGAANDWYGSLKHSKTKDWDILEGEFISQYNYNTEFPMTVRELEVTKQDDKKSFTTFLARWREKAALIINRPHESEQVRMFVKNLRSTYRDHIRFMPLNTFAEVYEVGIRIEESLQEKKATIKFNNYHDKKQGNGGSTSMKEVNALNSSSKPQRVFSNLGMTLSQALDKLQKNGHLEPLEPRDPPPPEKRGRSFDENMYCKFHQVIGHKTDNCARLRHEIQDLIDEGKVVPPSEGH*

Click here to download the sequence:
Link to NCBI Protein BLAST