Transcript Information: R_Transcript_275509.p1


Annotated TAIR IDAT1G49000.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: stem; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G18560.1); Has 105 Blast hits to 105 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 105; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:18123559-18124029 | Reverse length=156
E-Value6E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.4595302332552
Replicate 28.5893956248492
Replicate 37.0282035806377
Condition 2: 8 Hour
Replicate 13.1998573510605
Replicate 21.905756975101
Replicate 32.1658171762962
Condition 3: 24 Hour
Replicate 11.5653050382525
Replicate 24.8872448677984
Replicate 32.8603250443104


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_275509.p1 GENE.R_Transcript_275509~~R_Transcript_275509.p1 ORF type:complete len:176 (-),score=32.49 R_Transcript_275509:274-801(-)
ATGGTCCGACCATTTCCATACCCTTTAATGGACTCACAAAACTTCCAATCAATCTCCATAACCATAGGCCTTGTTTCCTCCATCTTCACCCTCGTGGCTCTGTGTGCCAAACACGGCCTTAAAACATCATCCAAGCGACACAACGAAGAAGATGATGAGTTATATGAGGTTAAGAGCAGTAGTTCTTCCTCATCAAAGAATAATAACCTCAACAAAACTCCGATGTCGAAGTCTCCATTGGCTTCTCCTAGGAGGCTTTTAACCAGTATTAGCAATCTAACTGGTAACAAGAAGAACAAGGAGGAAAGTGATCGTATGGTTGAAGATCATAAGGACGTGTTTGGAGAAGGTGGGTTGTGGCAGAAGAATATTTTGATGGGGGAAAAATGTCAACCTCCTGAATTTTCAGGAGTAATTTATTATGATAATTATGGGAACAGAATTTCTGAGATGCCCAGGTCTCCTAGAGCTTCTGCTGTTGCTGGTTTGAATACCAGTTTCTCTTTTCCTGTTCCTAGCCACCATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_275509.p1 GENE.R_Transcript_275509~~R_Transcript_275509.p1 ORF type:complete len:176 (-),score=32.49 R_Transcript_275509:274-801(-)
MVRPFPYPLMDSQNFQSISITIGLVSSIFTLVALCAKHGLKTSSKRHNEEDDELYEVKSSSSSSSKNNNLNKTPMSKSPLASPRRLLTSISNLTGNKKNKEESDRMVEDHKDVFGEGGLWQKNILMGEKCQPPEFSGVIYYDNYGNRISEMPRSPRASAVAGLNTSFSFPVPSHH*

Click here to download the sequence:
Link to NCBI Protein BLAST