Transcript Information: R_Transcript_275877.p1


Annotated TAIR IDAT5G33393.1
Annotated Gene Nameunknown protein; LOCATED IN: chloroplast; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:12656430-12658588 | Reverse length=435
E-Value1E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.22457585878581
Condition 2: 8 Hour
Replicate 10
Replicate 20.21922433177633
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.43245605667799
Replicate 30.64375602020286


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_275877.p1 GENE.R_Transcript_275877~~R_Transcript_275877.p1 ORF type:3prime_partial len:102 (+),score=15.59,zf-GRF|PF06839.8|2e-08 R_Transcript_275877:100-402(+)
ATGGCACCATGCTCCAATTCAAGCTCCCCATCACCTTTGTGTCATTGTGGGAACCCTCTTACACAGTATGTTTCATGGACCCAAAAAAATCCCGGCCGGAGATTTTTGTGTTGCCCTGACTATAACCCCAGGACGAAAACTAGTGCTTGTGGGGCGTTTAGATGGGTTGATGAAATGATGACTGAATGGCAAAAGAACATCATAAACGAGCTTATAGTGGAGAAACAACAACTTTTGACTGAGGTGAGGAAGAAGGAGAAGCAAGTGCAGACATTGGAAGCAGAAAATAACACAGTGAAAGTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_275877.p1 GENE.R_Transcript_275877~~R_Transcript_275877.p1 ORF type:3prime_partial len:102 (+),score=15.59,zf-GRF|PF06839.8|2e-08 R_Transcript_275877:100-402(+)
MAPCSNSSSPSPLCHCGNPLTQYVSWTQKNPGRRFLCCPDYNPRTKTSACGAFRWVDEMMTEWQKNIINELIVEKQQLLTEVRKKEKQVQTLEAENNTVKV

Click here to download the sequence:
Link to NCBI Protein BLAST