Transcript Information: R_Transcript_276055.p1


Annotated TAIR IDAT4G19170.1
Annotated Gene Namenine-cis-epoxycarotenoid dioxygenase 4
Annotated Gene Symbol(s)NCED4, CCD4
Annotation TypeOrtholog
Chromosome Positionchr4:10481835-10483622 | Forward length=595
E-Value1.9E-275
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5214715668268
Replicate 20.23629276995834
Replicate 30.55241328608085
Condition 2: 8 Hour
Replicate 10.55112879302481
Replicate 20.32354973725188
Replicate 30.029182653730526
Condition 3: 24 Hour
Replicate 10.40600623714589
Replicate 20.21275169347824
Replicate 30.24632465081717


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_276055.p1 GENE.R_Transcript_276055~~R_Transcript_276055.p1 ORF type:complete len:622 (+),score=100.38,RPE65|PF03055.11|5.4e-101 R_Transcript_276055:58-1923(+)
ATGCAAACAATGGATGCTTTTTCTTCTTCTTTCCTTTCATCATTACCACAACCAAACCGTGGTCTTAGAATCAAACCTTCATCATCACCCCCTCAACTCAACATTTCTTCAGTGAGAATTGAAGAGAATCCTAGAGCGGCTGTGAATTCATCACCCACCACATTAAGATCAGCTCCCACTACATTGCCAAAATCACCAAAAACCAAAGTCCCTCCACCGTCACCACCACCACCACCTTCTCCTACTCCCAAAGGTCAGCCCAAAAAGGTGACAAGGAGGTCCAAAACACCACCGCCACAAAGACCAATACCTTCATTTGGATCAACCATTTTAAACACCATCGATGATGTGATCAACACCTTTATCGACCCTCCTTCGCGGCCATCAATTGATCCAAGATTTGTTCTCTCGGACAACTTTGCTCCAGTGGAGGAGCTCCCTCCTACGGAATGTGAGACCATTGAGGGGACCCTACCCTTATGCCTCCATGGGGCCTACATCCGCAATGGCCCCAACCCACAATTCCTCCCTCGTGGGCCCTACCACTTGTTTGATGGGGATGGCATGCTACATGCCATACGTATATCAGATGGCAAGGCAACCCTATGTAGCCGCTTTGTCAAGACAAACAAGTACAAGATGGAGAATGCAGCAGGAAACAGTGTGTTCCCAAACGTCTTCTCCGGGTTTAATGGCCTTGTAGGGTCTGCAACTCGAGGGACTTTGTCAGCTTTACGGATTGTTTCTGGACAATTTAACTTGATGAACGGATTCGGGTTAGCAAACACTAGCCTAGCCTTCTTTGGAAACCGTCTCTATGCCATAGGTGAATCGGACCTCCCTTACGAGGTACAAGTCACACCAAGCGGAGATATCCAAACAATTGGTAGATCTGACTTTGATGGGAAGCTATTCTTGAGCATGACAGCACACCCCAAGGTCGATCTCGATACTGGTGAGGCCTTTGCCTTTCGTTACGGCCCTATCCCACCATTTGTGACCTACTTTAGATTTGACTCGAAAGGAAACAAATTCCCAGATGTGCCCATCTTCTCAATGCTACAACCAGCCTTCCTACATGACTTTGCCATCACCAAAAAATATGCAATTTTTGGAGACATCCAAATTGGGATGGACCCTCTAGGAATGCTAAGGGGTGGATCTCCAGTGGGTTTGAACCCATCAAAGGTGTCTCGGGTTGGAGTCATTCCAAGGTATGCTAGTGATGAGAAGGACATGAGGTGGTTCGACGTACCAGGGTTCAACATAATTCATGCTATCAATGCGTGGGATGAGATTGAGGAGAATGGGGATGAAACCATTGTCATGGTAGCACCTAATATATTATCCGCTGAACACACATTGGATAAACTAGAGCTTGTTCACGCACTAGTGGAAAAAGTCAGGATTAATCTACGGACTGGGGTTGTAAGTAGACAACCATTATCAGCAAGGAATCTCGACTTTGGAGTCATAAATCCGGCCTACATGGGGAAGAAGAACAAGTATGTCTACGCAGCCGTTGGGGATCCAATGCCCAAAGTTTCAGGGGTTGTGAAGATGGATGTGTTGGAGACTCAAGACCGAAAAGACTGCATAGTAGCGAGCCGGATGTACGGTCCAGGTTGCTATGGTGGTGAGCCATTTTTCGTTGCGAGGGATCCAGATAATCTTGATGCTGATGAGGATGATGGGTACGTCGTGTGCTATGTTCATAATGAGAATACGGATGAATCGAGGTTCGTAGTCATGGATGCCAAGTCACCTAGCCTTGATGTTGTTGCCACTGTGAAGCTACCTCAACGAGTGCCCTATGGATTTCATGGATTGTTTGTGAGGGATAAGGATCTCAAATCATCAGGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_276055.p1 GENE.R_Transcript_276055~~R_Transcript_276055.p1 ORF type:complete len:622 (+),score=100.38,RPE65|PF03055.11|5.4e-101 R_Transcript_276055:58-1923(+)
MQTMDAFSSSFLSSLPQPNRGLRIKPSSSPPQLNISSVRIEENPRAAVNSSPTTLRSAPTTLPKSPKTKVPPPSPPPPPSPTPKGQPKKVTRRSKTPPPQRPIPSFGSTILNTIDDVINTFIDPPSRPSIDPRFVLSDNFAPVEELPPTECETIEGTLPLCLHGAYIRNGPNPQFLPRGPYHLFDGDGMLHAIRISDGKATLCSRFVKTNKYKMENAAGNSVFPNVFSGFNGLVGSATRGTLSALRIVSGQFNLMNGFGLANTSLAFFGNRLYAIGESDLPYEVQVTPSGDIQTIGRSDFDGKLFLSMTAHPKVDLDTGEAFAFRYGPIPPFVTYFRFDSKGNKFPDVPIFSMLQPAFLHDFAITKKYAIFGDIQIGMDPLGMLRGGSPVGLNPSKVSRVGVIPRYASDEKDMRWFDVPGFNIIHAINAWDEIEENGDETIVMVAPNILSAEHTLDKLELVHALVEKVRINLRTGVVSRQPLSARNLDFGVINPAYMGKKNKYVYAAVGDPMPKVSGVVKMDVLETQDRKDCIVASRMYGPGCYGGEPFFVARDPDNLDADEDDGYVVCYVHNENTDESRFVVMDAKSPSLDVVATVKLPQRVPYGFHGLFVRDKDLKSSG*

Click here to download the sequence:
Link to NCBI Protein BLAST