Transcript Information: R_Transcript_276065.p1


Annotated TAIR IDAT5G40400.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:16166444-16168276 | Forward length=610
E-Value8E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.2724322530555
Replicate 20
Replicate 30.85472901478181
Condition 2: 8 Hour
Replicate 10.1827303354272
Replicate 20.66748901018464
Replicate 30.27091956149831
Condition 3: 24 Hour
Replicate 10.34265383921946
Replicate 20.32918296851608
Replicate 30.81670539876482


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_276065.p1 GENE.R_Transcript_276065~~R_Transcript_276065.p1 ORF type:internal len:134 (+),score=20.77,PPR_1|PF12854.3|98,PPR_1|PF12854.3|0.056,PPR_1|PF12854.3|9.2e-05,PPR_1|PF12854.3|0.00052,PPR_2|PF13041.2|0.00065,PPR_2|PF13041.2|5.3e-05,PPR_2|PF13041.2|1.8e-05,PPR_2|PF13041.2|7.9,PPR|PF01535.16|0.26,PPR|PF01535.16|11,PPR|PF01535.16|1.6e-05,PPR|PF01535.16|0.39,PPR_3|PF13812.2|0.059,PPR_3|PF13812.2|0.025,PPR_3|PF13812.2|57 R_Transcript_276065:2-400(+)
TCCAGTGATACATATAAGTATTTGATTGTTTCTTTGGCTCAGGGGAACCATCCATTTGTAGCTGCTAAGCTCTTAGATAGAATGCTAGAAGAAGGTCGCGAGCCTGATGAGGAAATATATGGCAAGTTGATTAAATCACTATGCGGTGATGATCACCTAGAAGAGGCATTCCGACATAAAAGCGACAAGATTGAAAAGGGTCTTAAGCCCTCGTTAGACATCTATCACAATCTGATTAGCTGCTTGTGCAGATTGAACAGATGCTCAGAAGCAGAAGCCCTGATGCAGGAAATGATCTTACACGGCCTTAAACCTGACAACAATATCTGTAGGGAGTTGGTGTTTGGGTACTGTAAAGCACAAAATATTGATAAAGCAGAGTCCTTGCTCATTTCACTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_276065.p1 GENE.R_Transcript_276065~~R_Transcript_276065.p1 ORF type:internal len:134 (+),score=20.77,PPR_1|PF12854.3|98,PPR_1|PF12854.3|0.056,PPR_1|PF12854.3|9.2e-05,PPR_1|PF12854.3|0.00052,PPR_2|PF13041.2|0.00065,PPR_2|PF13041.2|5.3e-05,PPR_2|PF13041.2|1.8e-05,PPR_2|PF13041.2|7.9,PPR|PF01535.16|0.26,PPR|PF01535.16|11,PPR|PF01535.16|1.6e-05,PPR|PF01535.16|0.39,PPR_3|PF13812.2|0.059,PPR_3|PF13812.2|0.025,PPR_3|PF13812.2|57 R_Transcript_276065:2-400(+)
SSDTYKYLIVSLAQGNHPFVAAKLLDRMLEEGREPDEEIYGKLIKSLCGDDHLEEAFRHKSDKIEKGLKPSLDIYHNLISCLCRLNRCSEAEALMQEMILHGLKPDNNICRELVFGYCKAQNIDKAESLLISL

Click here to download the sequence:
Link to NCBI Protein BLAST