Transcript Information: R_Transcript_276066.p1


Annotated TAIR IDAT5G40400.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:16166444-16168276 | Forward length=610
E-Value5E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.34117684027512
Replicate 20
Replicate 30.42816331955425
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_276066.p1 GENE.R_Transcript_276066~~R_Transcript_276066.p1 ORF type:internal len:107 (-),score=16.64,PPR_2|PF13041.2|3.2,PPR_2|PF13041.2|0.00039,PPR_2|PF13041.2|15,PPR_1|PF12854.3|0.015,PPR_1|PF12854.3|0.025,PPR|PF01535.16|4e+03,PPR|PF01535.16|0.00017,PPR|PF01535.16|3.7 R_Transcript_276066:1-318(-)
CATAAAAGTGACATGATTGAAAAGGGTCTTAAGCCCTCGTTAGACATCTATCAAAATCTGATTAGCTGCTTGGGCAGATTGAACAGATGCTCCGAAGCAGAAGCCCTGATGCAGGAAATGATCTTACATGGCCTTAAACCTGACAACAATATTTGTAGGGAGTTGGTGTTTGAGTACTGTAAAGCACAAAATATTGATAAAGCAGAGTCCTTGCTCATTTCACTGGCTACTGAATATCAGCTGCATGATTTATATAGTTGTAATTTACTTTTCAAGGCTAGAAGTGAGCACGGTGGTGCTATTGAATTGATGGAGCTA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_276066.p1 GENE.R_Transcript_276066~~R_Transcript_276066.p1 ORF type:internal len:107 (-),score=16.64,PPR_2|PF13041.2|3.2,PPR_2|PF13041.2|0.00039,PPR_2|PF13041.2|15,PPR_1|PF12854.3|0.015,PPR_1|PF12854.3|0.025,PPR|PF01535.16|4e+03,PPR|PF01535.16|0.00017,PPR|PF01535.16|3.7 R_Transcript_276066:1-318(-)
HKSDMIEKGLKPSLDIYQNLISCLGRLNRCSEAEALMQEMILHGLKPDNNICRELVFEYCKAQNIDKAESLLISLATEYQLHDLYSCNLLFKARSEHGGAIELMEL

Click here to download the sequence:
Link to NCBI Protein BLAST