Transcript Information: R_Transcript_27611.p1


Annotated TAIR IDAT5G51670.1
Annotated Gene NameProtein of unknown function (DUF668)
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:20993560-20995096 | Forward length=474
E-Value3E-43
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.023746816426
Replicate 26.3106857992806
Replicate 37.946578913272
Condition 2: 8 Hour
Replicate 17.875369484437
Replicate 28.8564166842898
Replicate 39.5601881778723
Condition 3: 24 Hour
Replicate 111.156462501103
Replicate 28.3946280327899
Replicate 310.820887710376


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_27611.p1 GENE.R_Transcript_27611~~R_Transcript_27611.p1 ORF type:complete len:712 (+),score=71.23,TTC5_OB|PF16669.1|3e-31,DUF3475|PF11961.4|3.5e-22,DUF3475|PF11961.4|6.8e+02,TPR_11|PF13414.2|6.5e-08,TPR_11|PF13414.2|11,TPR_11|PF13414.2|0.0041,TPR_2|PF07719.13|3.1,TPR_2|PF07719.13|0.0017,TPR_2|PF07719.13|1.3e+03,TPR_2|PF07719.13|5.2e+02,TPR_2|PF07719.13|0.072,TPR_1|PF00515.24|1.5,TPR_1|PF00515.24|0.00027,TPR_1|PF00515.24|1.1e+03,TPR_1|PF00515.24|29,TPR_1|PF00515.24|4.8e+03,TPR_1|PF00515.24|0.53,TPR_8|PF13181.2|68,TPR_8|PF13181.2|0.0059,TPR_8|PF13181.2|2.4e+03,TPR_8|PF13181.2|2.3e+03,TPR_8|PF13181.2|15,TPR_16|PF13432.2|0.004,TPR_16|PF13432.2|1e+03,TPR_16|PF13432.2|28,TPR_12|PF13424.2|0.0059,TPR_12|PF13424.2|1.2e+03,TPR_12|PF13424.2|17 R_Transcript_27611:172-2307(+)
ATGGCGAGAGAAACATGGCTAAGCAAGCTTAAATCCCAAATCTCAAACAAGCTCATCCACCCTACCACTACAAAGCTCGCCAGATCAAAGTCCCCCCACGTGGGCGTCTTAGCCTTCGAGATCGCCGGTCTGCTCGCCAAGCTCCTCGCCCTCCACCAGTCTCTCTCCGACAAGTGCGTCGTCCGCCTCAAGAACGAGGTGATCGCGCTCGAGGGCGTCCGCAAGATCGTCTCCAACGACGAGTCTTTCCTCCTAACCCTCGCCTGCGCCGAGATGCTCCAGACTCTCCACCTCATCTCCAGGTCCGTCGCCCGGCTCAGCGGCCGGTGCGCGGACCCCGCCCTCAGGTCCTTCCCAGACTACTTGGAGGACTTTGCCAGTACGGGGCGGGACCACCAGGCATGGGCCGCCCCGTGTGGGAAGGACCTCGATGGCCTGGCCCGTCGGGCGGACCGGTACATCGCGGCTACCTCCGTGCTGTACCGGGAGATGGAGGAGCTCTCCTTGCTTGAGAATAGTCTCAGGAAGAAGAGCCCCGTCAGGGAGGAGAATGTTCTAGAATTACAACAGAAGATTGTGTGGCAAAAACAGGAGGTTAAGCATGTCAAAGAGAAGTCCTTATGGAACCGAAGCTTTGATTCCGTGGTTTTGCTTTTAGCTCGGTTGATCTTCACTATCCTCGCAAGAGTCAAGCTGGTTTTCGGGATCGGCCATAGCTACTACCCTCTCCCGCCTACTCTCCCTCGCAGCCTCTCCGCTTCCGCCACCGTCTTCCCCTCCTCGGATCTCGGAAACCCCAATCAACTCTTCGTATCCGGTCCGCTCATGTCATCCACACCAACCCGCCACAACAACCACAGCCACAGCCACAGCCACAGACACAGACACAGCCATAGCCATAGCCCAAGTGATAATGATGAAGATCCACTGACAAGAGCCTGGAAAGCCACCGATGAACTGTACAGTATCCGGGACACCTTTTACCCATCAAACCCAGATGACAAAATCTCCAAATTACAACAAAAATCCAGTTGGTGTCTCGACCTACTTGATTCCATCCCACCTGAATTTAGAAAATCTGCTATGCAACGTGCAACTTATGAACATCTGAAAGGGAAGATATTGGATGTGTTTCCAGACTATAGGAAAGAGGCAGAAGATCATCTTTCAAAAGCGGTTAAGTTAAATCCATCTCTCACAGATGCTTGGCTATCTCTAGGGAACTGCTTCTGGAAGAAAGGAGATTTAGTATCAGCAAAGAACTGTTTCACCCGCGCATTGAGCAAGGGTCCAGAGAAAAGCATATTGTGTCAATTGTCAATGCTGGAAAGGAAAATGGCTCAAGGTAGTGAGAATCAAGCACAAATTGTTGAGGAGAGCATTCAGCATGCAAAGGAAGCTATAACTTTAGATGTGGCAGATGGGAATTCTTGGTATAACCTTGGTAATGCATGCCTTACAAGCTTTTTTGTGACGGGATCTTGGGATCACTCAAAACTTTCTCAGTCGTTGAAAGCTTACCAAAATGCTGAGAAAGACAAAAAGATGAAGCATAATCCTGATTTGTTCTTCAACTGTGCAACTGTGAATAAATATTTAGAAAACTATGATAAGGCACTTATTGGATTTGAAGCTGCTGCTAAAATTGATCCTGGCCTGAATGCTTCCAACGAGGTCCAGAAAATAGTTTGTCTGCTTGACAAATTGAAAAGTTCTCTTAAGGGACTGACTAAAACGAAGCGATTTGCTTCTGCTGATGTGAATCCAATGTACAGGAAGGCCACTATAGATCTTCTATTTGAAGGGCTGAACAAGTCAATAGCAGTCAATAGCAAAGTGTTGTCCTTTGTTAAGCATGAGAACATTGCTCCACTATACTATATAGCTTGTGATTCTAATCAAGCTTGCTTTGTGCTATCCTTATACGGAACAGACGACCATGCGATCAAAGAAGGAGATCAAGTAACATTGTTGGAACCTTGGTATAAGAGCATCGATTTTTCTTGGAAAGGAAAGCAGTACCAGTTTAAATCAATCCGTGTTGACTTCAAAGAGCAATTACTTGTGAATGGTAAAGCTCTCTCAGCAAGTCAAGAGATTCGTTCATCGATCTATGCACAACACAAGCCAACTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_27611.p1 GENE.R_Transcript_27611~~R_Transcript_27611.p1 ORF type:complete len:712 (+),score=71.23,TTC5_OB|PF16669.1|3e-31,DUF3475|PF11961.4|3.5e-22,DUF3475|PF11961.4|6.8e+02,TPR_11|PF13414.2|6.5e-08,TPR_11|PF13414.2|11,TPR_11|PF13414.2|0.0041,TPR_2|PF07719.13|3.1,TPR_2|PF07719.13|0.0017,TPR_2|PF07719.13|1.3e+03,TPR_2|PF07719.13|5.2e+02,TPR_2|PF07719.13|0.072,TPR_1|PF00515.24|1.5,TPR_1|PF00515.24|0.00027,TPR_1|PF00515.24|1.1e+03,TPR_1|PF00515.24|29,TPR_1|PF00515.24|4.8e+03,TPR_1|PF00515.24|0.53,TPR_8|PF13181.2|68,TPR_8|PF13181.2|0.0059,TPR_8|PF13181.2|2.4e+03,TPR_8|PF13181.2|2.3e+03,TPR_8|PF13181.2|15,TPR_16|PF13432.2|0.004,TPR_16|PF13432.2|1e+03,TPR_16|PF13432.2|28,TPR_12|PF13424.2|0.0059,TPR_12|PF13424.2|1.2e+03,TPR_12|PF13424.2|17 R_Transcript_27611:172-2307(+)
MARETWLSKLKSQISNKLIHPTTTKLARSKSPHVGVLAFEIAGLLAKLLALHQSLSDKCVVRLKNEVIALEGVRKIVSNDESFLLTLACAEMLQTLHLISRSVARLSGRCADPALRSFPDYLEDFASTGRDHQAWAAPCGKDLDGLARRADRYIAATSVLYREMEELSLLENSLRKKSPVREENVLELQQKIVWQKQEVKHVKEKSLWNRSFDSVVLLLARLIFTILARVKLVFGIGHSYYPLPPTLPRSLSASATVFPSSDLGNPNQLFVSGPLMSSTPTRHNNHSHSHSHRHRHSHSHSPSDNDEDPLTRAWKATDELYSIRDTFYPSNPDDKISKLQQKSSWCLDLLDSIPPEFRKSAMQRATYEHLKGKILDVFPDYRKEAEDHLSKAVKLNPSLTDAWLSLGNCFWKKGDLVSAKNCFTRALSKGPEKSILCQLSMLERKMAQGSENQAQIVEESIQHAKEAITLDVADGNSWYNLGNACLTSFFVTGSWDHSKLSQSLKAYQNAEKDKKMKHNPDLFFNCATVNKYLENYDKALIGFEAAAKIDPGLNASNEVQKIVCLLDKLKSSLKGLTKTKRFASADVNPMYRKATIDLLFEGLNKSIAVNSKVLSFVKHENIAPLYYIACDSNQACFVLSLYGTDDHAIKEGDQVTLLEPWYKSIDFSWKGKQYQFKSIRVDFKEQLLVNGKALSASQEIRSSIYAQHKPT*

Click here to download the sequence:
Link to NCBI Protein BLAST