Transcript Information: R_Transcript_276122.p1


Annotated TAIR IDAT5G66090.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:26425831-26426955 | Forward length=210
E-Value5E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.86098872427919
Replicate 20.8913523761636
Replicate 30.43220259615382
Condition 2: 8 Hour
Replicate 10.46199745183481
Replicate 20.21095171548288
Replicate 30.17124160962629
Condition 3: 24 Hour
Replicate 10.97462389174216
Replicate 20.52017120024946
Replicate 30.41297556013014


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_276122.p1 GENE.R_Transcript_276122~~R_Transcript_276122.p1 ORF type:5prime_partial len:212 (+),score=35.63 R_Transcript_276122:1-636(+)
GCGGCTGAGAATGTTCTCGTAGCCCTCGGGTCTCTACCCACAGACACAGTCACCAACACCATAACAGGGGCGTCCTCCCTATTCTCCTTAATTGCAGCTGCTCACCATTTACTTGATCAATCAATGGCTTTCTCACACTACTTAGTTGCAGCTGCTCCTGTTGAACCCTCTCTCACTTCCAGAATTTCACTTCGAAATGCTCTAACTTTAGTTTCAGCATACCGCCTTTCTTCACCTTCTACTACCGTGCCGCTCAATTTTGACGCTCGTAGTATCTCCCTTGTATCCAGCTTCTGCAGAACCAACCGTTGCGTTAAAGCTAAGGCTCAAGAATCTGAAGCCAGTGTAGATGTGGATGCATTTACTCATTTCAAACATTTGCTTCTCCCAATAACAGATCGAAATCCATACCTTTCTGAGGGAACAAGACAGGCTGCTGCAACAAGTGCTGCATTGGCAAAGAAGTATGGAGCTGATATAACAGTTGTAGTTATTGATGAGAAGCCAAAAGAGTCACACCCTGAGCATGATACTCAGCTTGCCAGCATCCGTTGGCACTTGTCTGAAGATGTAATTCATGAAGACTGGAGCAAACCATATTTTGTGGTGCTTGATCCCATAAGTTATTTGGAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_276122.p1 GENE.R_Transcript_276122~~R_Transcript_276122.p1 ORF type:5prime_partial len:212 (+),score=35.63 R_Transcript_276122:1-636(+)
AAENVLVALGSLPTDTVTNTITGASSLFSLIAAAHHLLDQSMAFSHYLVAAAPVEPSLTSRISLRNALTLVSAYRLSSPSTTVPLNFDARSISLVSSFCRTNRCVKAKAQESEASVDVDAFTHFKHLLLPITDRNPYLSEGTRQAAATSAALAKKYGADITVVVIDEKPKESHPEHDTQLASIRWHLSEDVIHEDWSKPYFVVLDPISYLE*

Click here to download the sequence:
Link to NCBI Protein BLAST