Transcript Information: R_Transcript_276125.p1


Annotated TAIR IDAT5G66090.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:26425831-26426955 | Forward length=210
E-Value7.4E-76
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.6575308876136
Replicate 25.3943064310647
Replicate 32.2635116201732
Condition 2: 8 Hour
Replicate 13.0002443215992
Replicate 23.7120831515012
Replicate 32.4393468817911
Condition 3: 24 Hour
Replicate 13.5389505212666
Replicate 24.9689713706044
Replicate 39.2568553418894


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_276125.p1 GENE.R_Transcript_276125~~R_Transcript_276125.p1 ORF type:5prime_partial len:253 (+),score=45.15 R_Transcript_276125:3-761(+)
CGGCTGAGAGTGTTCTCGAAGCCCTCGGGTCTCTACACAGACACAGTCACCAACACCCTAACAGGGGCGTCCTCCCTATTCTCTTTATTAACATTCCTCACCATTTTACATGATCAATCAATGGCTTTCTCACACTACTTAGTTGCAGCTGCTCCTGTTGAACCCTCTCTCACTTCCAGAATTTCACTTCGAAATGCTCTAACTTTAGTTTCAGCATACCGCCTTTCTTCACCTTCTACTACCGTGCCGCTCAATTTTGACGCTCGTAGTATCTCCCTTGTATCCAGCTTCTGCAGAACCAACCGTTGCGTTAAAGCTAAGGCTCAAGAATCTGAAGCCAGTGTAGATGTGGATGCATTTACTCATTTCAAACATTTGCTTCTCCCAATAACAGATCGAAATCCATACCTTTCTGAGGGAACAAGACAGGCTGCTGCAACAAGTGCTGCATTGGCAAAGAAGTATGGAGCTGATATAACAGTTGTAGTTATTGATGAGAAGCCAAAAGAGTCACACCCTGAGCATGATACTCAGCTTGCCAGCATCCGTTGGCACTTGTCTGAAGGAGGATTTCAAGAATTTAAGCTACTGGAGAAACTTGGAGAAGGGAGTAGACCTACCGCCATAATTGGTGAGGTTGCAGATGATTTGAGTTTAGACTTGGTTGTTTTGAGCATGGAAGCCATTCACTCCAAGCATGTGGATGCAAATCTTCTGGCAGAGTTCATTCCCTGCCCTGTATTGCTATTGCCTTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_276125.p1 GENE.R_Transcript_276125~~R_Transcript_276125.p1 ORF type:5prime_partial len:253 (+),score=45.15 R_Transcript_276125:3-761(+)
RLRVFSKPSGLYTDTVTNTLTGASSLFSLLTFLTILHDQSMAFSHYLVAAAPVEPSLTSRISLRNALTLVSAYRLSSPSTTVPLNFDARSISLVSSFCRTNRCVKAKAQESEASVDVDAFTHFKHLLLPITDRNPYLSEGTRQAAATSAALAKKYGADITVVVIDEKPKESHPEHDTQLASIRWHLSEGGFQEFKLLEKLGEGSRPTAIIGEVADDLSLDLVVLSMEAIHSKHVDANLLAEFIPCPVLLLPL*

Click here to download the sequence:
Link to NCBI Protein BLAST