Transcript Information: R_Transcript_27653.p1


Annotated TAIR IDAT3G01510.1
Annotated Gene Namelike SEX4 1
Annotated Gene Symbol(s)LSF1
Annotation TypeOrtholog
Chromosome Positionchr3:198855-201682 | Reverse length=591
E-Value3.8E-191
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2296731590547
Replicate 20.61883832805931
Replicate 30.48224710728742
Condition 2: 8 Hour
Replicate 10.92788540852719
Replicate 20.659057570056
Replicate 31.108203595771
Condition 3: 24 Hour
Replicate 11.2566378693059
Replicate 20.55718548776195
Replicate 30.87550818747589


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_27653.p1 GENE.R_Transcript_27653~~R_Transcript_27653.p1 ORF type:5prime_partial len:475 (+),score=76.44,DSPc|PF00782.16|1e-10 R_Transcript_27653:2-1426(+)
ACTCTCACTCTCACTCTCACTCTCACTCTCACTCTCACTCTCACTCGTTTGTTTCATCAATTCGAGCAGCAAAATATCAAAAATTCCAGTTCCATTGCGATGTCTTTGTATAGCCGTTCAATTTCGTCCTCAATATGGGGGATCGAATTTAGGTCATTTAATGGCGGCATAATTGAACCGAAGCTGTTGAGACGCTCAAATTATTGTAACGTTAGAATCAATCGGTCAATTTCAAGGGTTTTTGCCATGTCAGATGGAAATCAAACGGCATACAAGATGAATTTGAACGAGTATATGGTCACTCTGGAGAAGCCACTTGGTATTCGCTTTGCTCTTTCTTTGGATGGCAAGGTTTTTGTTCATGCTCTCCGCAAAGGAGGGAATGCTGAAAAGTCGAGGATAGTAATGGTGGGTGACACTTTGAGGAAGGCAAGTGATTCATCTGGTGGTCAATTTATTGAGATCAAGGACATTGGTGATGCACAGAATATGCTCAAGGAGAAAGCTGGATCTTTTAGCCTGGTTCTTGAGAGACCTTTCTCACCGTTCCCCATACATGAGCTTTTTCTGACAGATGACATCGATATTCTGTTCAATCGAGGCCGTGTTCCCATTGTTAGCTGGAGCAAGTCCCTAATGTCTTCAGGTTTGCAAGCCTCATGTGAAAGTAATGGGAATTCTGGATTTGTCATGTTCTCTTCCAAGTTCCTTTCATCCAAGGCATGGGTGGTGCTTACTGGTCAGAATGGAAATGGTAATCCATTCCTACGGAAAAGCACATTTCCGCCACCAGCTACCCAACTTGTTTGCATTTCTTCTGAAGAAGATTCGAATGATGCTGATTGGGGTCATGGAAGCTTCCCACTAGATGAATATGCCAAGGCTCTTGATCGTTCAAAAGGAGAACTCTACTACAACCACTCTCTTGGTATGGGCTACAGTAAGATAACTGAACACATATATGTGGGTTCCTGCATACAAAACGAAGCTGATGTGGAGGCTCTGGCAAAAGTTGGAGTCACTGCTGTGCTGAATTTCCAGAGTGCAATTGAAGCAGAAAATTGGGGAATCAATTCGAACTCTATCAATGAGTTTTGCCAACGATTTAATATTCTAATGATCAGTTACCCAATAAGGGAATGGGATTCCTTTGATCTGAGGAAGAAACTACCTTTCTGTGTAGGGCTTCTGTTACGTTTGTTGAGAAAAAACCATCGTGTATTTGTTACTTGTACGACGGGCTTTGACCGGTCTCCTGCTTGTGTCATTGCATATCTGCACTGGATGACAGACACTTCACTGAATGCAGCTTATAATTTTGTCACTGGGTTACATCCTTGTAAGCCGGACAGAACCATAATGCAGGCCGGCGATAGCTTGGGCAACATGGGATCTTATTGCCATGGTGGAGAATGGAAGACATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_27653.p1 GENE.R_Transcript_27653~~R_Transcript_27653.p1 ORF type:5prime_partial len:475 (+),score=76.44,DSPc|PF00782.16|1e-10 R_Transcript_27653:2-1426(+)
TLTLTLTLTLTLTLTRLFHQFEQQNIKNSSSIAMSLYSRSISSSIWGIEFRSFNGGIIEPKLLRRSNYCNVRINRSISRVFAMSDGNQTAYKMNLNEYMVTLEKPLGIRFALSLDGKVFVHALRKGGNAEKSRIVMVGDTLRKASDSSGGQFIEIKDIGDAQNMLKEKAGSFSLVLERPFSPFPIHELFLTDDIDILFNRGRVPIVSWSKSLMSSGLQASCESNGNSGFVMFSSKFLSSKAWVVLTGQNGNGNPFLRKSTFPPPATQLVCISSEEDSNDADWGHGSFPLDEYAKALDRSKGELYYNHSLGMGYSKITEHIYVGSCIQNEADVEALAKVGVTAVLNFQSAIEAENWGINSNSINEFCQRFNILMISYPIREWDSFDLRKKLPFCVGLLLRLLRKNHRVFVTCTTGFDRSPACVIAYLHWMTDTSLNAAYNFVTGLHPCKPDRTIMQAGDSLGNMGSYCHGGEWKT*

Click here to download the sequence:
Link to NCBI Protein BLAST