Transcript Information: R_Transcript_27658.p1


Annotated TAIR IDAT3G01510.1
Annotated Gene Namelike SEX4 1
Annotated Gene Symbol(s)LSF1
Annotation TypeOrtholog
Chromosome Positionchr3:198855-201682 | Reverse length=591
E-Value4.3E-296
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.505308366334
Replicate 20.5489228867006
Replicate 31.6094603212983
Condition 2: 8 Hour
Replicate 11.5603737466382
Replicate 21.0595842702523
Replicate 31.6016127017988
Condition 3: 24 Hour
Replicate 12.6258929835609
Replicate 21.6217102125425
Replicate 32.0385607306424


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_27658.p1 GENE.R_Transcript_27658~~R_Transcript_27658.p1 ORF type:5prime_partial len:612 (+),score=110.93,AMPK1_CBM|PF16561.1|9.2e-20,DSPc|PF00782.16|1.2e-10 R_Transcript_27658:2-1837(+)
ACTCTCACTCTCACTCTCACTCTCACTCTCACTCTCACTCTCACTCGTTTGTTTCATCAATTCGAGCAGCAAAATATCAAAAATTCCAGTTCCATTTCAATGTCTTTGTATAGCCGTTCAATTTCGTCCTCAATATGGGGGATCGAATTTAGGTCATTTAATGGCGGCATAATTGAACCGAAGCTGTTGAGACGCTCAAATTATTGTAACGTTAGAATCAATCGGTCAATTTCAAGGGTTTTTGCCATGTCAGATGGAAATCAAACGGCATACAAGATGAATTTGAACGAGTATATGGTCACTCTGGAGAAGCCACTTGGTATTCGCTTTGCTCTTTCTTTGGATGGCAAGGTTTTTGTTCATGCTCTCCGCAAAGGAGGGAATGCAGAAAAGTCAAGGATAGTTATGGTGGGTGACACTTTGAAGAAGGCAAGTGATTCATCTGGTGGTCAATTTATTGAGATCAAGGACATTGGTGATGCACAGAATATGCTCAAGGAGAAAGCTGGATCTTTTAGCCTGGTTCTTGAGAGACCTTTCTCACCGTTCCCCATACATGAGCTTTTTCTGACAGATGACATTGATATTCTTTTTAATCGAGGCCGTGTCCCCATTGCTAGTTGGAGCAAGTCCCTAATGTCTTCTGGTTTGCAAGCCTCATGTGAAAGTAATGGGAATTCTGGATTTGTCATGTTCTCTTCCAAGTTCCTTTCATCCAAGGCATGGGTGGTGCTTACTGGTCAGAATGGAAATGGTAATCCATTTCTACAGAAAAGCACATTTCCACCACCAACTACCCAACTTGTTTGCATTTCTTCTGAAGAAGATTCGAATGATGCTGATTGGGGTCATGGAAGCTTCCCACTAGATGAATATGCCAAGGCTCTTGATCGTTCAAAAGGAGAACTCTACTACAACCACTCTCTTGGTATGGGCTACAGTAAGATAACTGAACACATATATGTGGGTTCCTGCATACAAAACGAAGCTGATGTGGAGGCTCTGGCAAAAGTTGGAGTCACTGCTGTGCTGAATTTCCAGAGTGCAATTGAAGCAGAAAATTGGGGAATCAATTCGAACTCTATCAATGAGTTTTGCCAACGATTTAATATTCTAATGATCAGTTACCCAATAAGGGAATGGGATTCCTTTGATCTGAGGAAGAAACTACCTTTCTGTGTAGGGCTTCTGTTACGTTTGTTGAGAAAAAACCATCGTGTATTTGTTACTTGTACGACGGGCTTTGACCGGTCTCCTGCTTGTGTCATTGCATATCTGCACTGGATGACAGACACTTCACTGAATGCAGCTTATAATTTTGTCACTGGGTTACATCCTTGTAAGCCGGACAGGCCGGCGATAGCTTGGGCAACATGGGATCTTATTGCCATGGTGGAGAATGGAAGACATGATGGCCCTGCGACCCATTCTGTTACGTTTGTCTGGAATGGCCAAGAGGGTGAAGATGTATGTTTGGTTGGAGACTTTACTGGGAACTGGAAAGAGCCCATAAAGGCTTCCCACAAAGGAGGACCAAGATATGAAGTTGATGTGAGGCTACCACAAGGGAAGTACTATTACAAGTACATTGTGAATGGGCAGTGGAGGCACTCTATGGCCTCACCAACAGAAAGCGATGAAAGAGGGAATGTCAATAACATAATCATTATTGGTGATACAGCCAGTGTGAGGCCTTCTATTCTACAACAGAAAAAGGATGCCAATATTATAAAGGTTTTAGAAAGGCAGCTGACAGAGAATGAACGCTTCATGCTAGCAAAAGCAGCACGCTGTATTGCTTTCTCTATCTGTCCTATCAGATTAGCTCCAAAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_27658.p1 GENE.R_Transcript_27658~~R_Transcript_27658.p1 ORF type:5prime_partial len:612 (+),score=110.93,AMPK1_CBM|PF16561.1|9.2e-20,DSPc|PF00782.16|1.2e-10 R_Transcript_27658:2-1837(+)
TLTLTLTLTLTLTLTRLFHQFEQQNIKNSSSISMSLYSRSISSSIWGIEFRSFNGGIIEPKLLRRSNYCNVRINRSISRVFAMSDGNQTAYKMNLNEYMVTLEKPLGIRFALSLDGKVFVHALRKGGNAEKSRIVMVGDTLKKASDSSGGQFIEIKDIGDAQNMLKEKAGSFSLVLERPFSPFPIHELFLTDDIDILFNRGRVPIASWSKSLMSSGLQASCESNGNSGFVMFSSKFLSSKAWVVLTGQNGNGNPFLQKSTFPPPTTQLVCISSEEDSNDADWGHGSFPLDEYAKALDRSKGELYYNHSLGMGYSKITEHIYVGSCIQNEADVEALAKVGVTAVLNFQSAIEAENWGINSNSINEFCQRFNILMISYPIREWDSFDLRKKLPFCVGLLLRLLRKNHRVFVTCTTGFDRSPACVIAYLHWMTDTSLNAAYNFVTGLHPCKPDRPAIAWATWDLIAMVENGRHDGPATHSVTFVWNGQEGEDVCLVGDFTGNWKEPIKASHKGGPRYEVDVRLPQGKYYYKYIVNGQWRHSMASPTESDERGNVNNIIIIGDTASVRPSILQQKKDANIIKVLERQLTENERFMLAKAARCIAFSICPIRLAPK*

Click here to download the sequence:
Link to NCBI Protein BLAST