Transcript Information: R_Transcript_27659.p2


Annotated TAIR IDAT3G01510.1
Annotated Gene Namelike SEX4 1
Annotated Gene Symbol(s)LSF1
Annotation TypeOrtholog
Chromosome Positionchr3:198855-201682 | Reverse length=591
E-Value1.1E-171
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 21.986136525866
Replicate 31.1608144052104
Condition 2: 8 Hour
Replicate 11.240837750705
Replicate 22.1907620722783
Replicate 30.67455309737925
Condition 3: 24 Hour
Replicate 10.38780079776527
Replicate 21.0431541367165
Replicate 31.3310090687978


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_27659.p2 GENE.R_Transcript_27659~~R_Transcript_27659.p2 ORF type:complete len:296 (+),score=42.19,AMPK1_CBM|PF16561.1|2.8e-20,DSPc|PF00782.16|9.3e-10 R_Transcript_27659:963-1850(+)
ATGTGGGTTCCTGCATACAAAACGAAGCTGATGTGGAGGCTCTGGCAAAAGTTTTGTTTGTATCAGGGAGTCACTGCTGTGCTGAATTTCCAGAGTGCAATTGAAGCAGAAAATTGGGGAATCAATTCGAACTCTATCAATGAGTTTTGCCAACGATTTAATATTCTAATGATCAGTTACCCAATAAGGGAATGGGATTCCTTTGATCTGAGGAAGAAACTACCTTTCTGTGTAGGGCTTCTGTTACGTTTGTTGAGAAAAAACCATCGTGTATTTGTTACTTGTACGACGGGCTTTGACCGGTCTCCTGCTTGTGTCATTGCATATCTGCACTGGATGACAGACACTTCACTGAATGCAGCTTATAATTTTGTCACTGGGTTACATCCTTGTAAGCCGGACAGGCCGGCGATAGCTTGGGCAACATGGGATCTTATTGCCATGGTGGAGAATGGAAGACATGATGGCCCTGCGACCCATTCTGTTACGTTTGTCTGGAATGGCCAAGAGGGTGAAGATGTATGTTTGGTTGGAGACTTTACTGGGAACTGGAAAGAGCCCATAAAGGCTTCCCACAAAGGAGGACCAAGATATGAAGTTGATGTGAGGCTACCACAAGGGAAGTACTATTACAAGTACATTGTGAATGGGCAGTGGAGGCACTCTATGGCCTCACCAACAGAAAGCGATGAAAGAGGGAATGTCAATAACATAATCATTATTGGTGATACAGCCAGTGTGAGGCCTTCTATTCTACAACAGAAAAAGGATGCCAATATTATAAAGGTTTTAGAAAGGCAGCTGACAGAGAATGAACGCTTCATGCTAGCAAAAGCAGCACGCTGTATTGCTTTCTCTATCTGTCCTATCAGATTAGCTCCAAAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_27659.p2 GENE.R_Transcript_27659~~R_Transcript_27659.p2 ORF type:complete len:296 (+),score=42.19,AMPK1_CBM|PF16561.1|2.8e-20,DSPc|PF00782.16|9.3e-10 R_Transcript_27659:963-1850(+)
MWVPAYKTKLMWRLWQKFCLYQGVTAVLNFQSAIEAENWGINSNSINEFCQRFNILMISYPIREWDSFDLRKKLPFCVGLLLRLLRKNHRVFVTCTTGFDRSPACVIAYLHWMTDTSLNAAYNFVTGLHPCKPDRPAIAWATWDLIAMVENGRHDGPATHSVTFVWNGQEGEDVCLVGDFTGNWKEPIKASHKGGPRYEVDVRLPQGKYYYKYIVNGQWRHSMASPTESDERGNVNNIIIIGDTASVRPSILQQKKDANIIKVLERQLTENERFMLAKAARCIAFSICPIRLAPK*

Click here to download the sequence:
Link to NCBI Protein BLAST