Transcript Information: R_Transcript_276689.p1


Annotated TAIR IDAT4G23500.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:12264640-12267074 | Forward length=495
E-Value8.8E-95
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.816569454648
Replicate 26.8691600127395
Replicate 39.4737741910013
Condition 2: 8 Hour
Replicate 19.9757227562851
Replicate 211.318471055415
Replicate 311.989026767787
Condition 3: 24 Hour
Replicate 121.824088352262
Replicate 217.017946674828
Replicate 323.779234721568


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_276689.p1 GENE.R_Transcript_276689~~R_Transcript_276689.p1 ORF type:3prime_partial len:162 (-),score=26.47,Glyco_hydro_28|PF00295.13|1.3e-11 R_Transcript_276689:2-484(-)
ATGATGCTAACAAAATGTTTTTTCCCCTTATGCACAGATTCCTGCACAAACACAAGAATTGAGGACTGCTATATCGTGTCAGGGGACGACTGTGTTGCTGTCAAAAGTGGGTGGGATGAGTATGGCATCGCCTTCGGGATGCCCACCAAGCAGCTAGTTATCCGACGTCTGACATGCATTTCTCCAACAAGTGCTGTAATCGCGTTGGGAAGTGAGATGTCGGGTGGTATCCAAGATGTTAGGGCAGAGGACATTTTGGCAATCAACTCTGAATCAGGAATCAGGATCAAAACTGGAGCAGGCAGGGGAGGTTTTGTGAAGGACATATACGTGAAAGGAATGACAATGCATACAATGAAATGGGCTTTTTGGATGACAGGGAATTATGGGTCACATCCTGACGACAAGTATGATCCTAATGCTCTTCCTACCATACAGAACATTAACTACAGAGATATGGTAGCTGAGGATGTGATGATGGCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_276689.p1 GENE.R_Transcript_276689~~R_Transcript_276689.p1 ORF type:3prime_partial len:162 (-),score=26.47,Glyco_hydro_28|PF00295.13|1.3e-11 R_Transcript_276689:2-484(-)
MMLTKCFFPLCTDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAFGMPTKQLVIRRLTCISPTSAVIALGSEMSGGIQDVRAEDILAINSESGIRIKTGAGRGGFVKDIYVKGMTMHTMKWAFWMTGNYGSHPDDKYDPNALPTIQNINYRDMVAEDVMMA

Click here to download the sequence:
Link to NCBI Protein BLAST