Transcript Information: R_Transcript_276700.p1


Annotated TAIR IDAT5G65490.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SGT1 (InterPro:IPR010770); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:26178003-26180309 | Reverse length=643
E-Value2E-54
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.3096655152114
Replicate 25.27067623619
Replicate 36.4101158705282
Condition 2: 8 Hour
Replicate 15.8443628269145
Replicate 27.4536272803952
Replicate 39.9348321502529
Condition 3: 24 Hour
Replicate 18.6918447117234
Replicate 25.5365053182108
Replicate 38.3767758678249


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_276700.p1 GENE.R_Transcript_276700~~R_Transcript_276700.p1 ORF type:internal len:243 (-),score=87.45,SGT1|PF07093.7|1.5e-07,SGT1|PF07093.7|5.4e-41 R_Transcript_276700:3-728(-)
ATTGATGAGCTTCTTGCTTTACCATATTCACTGGATGATTTTAAAAGTGAAGAAGTTCCTCCATCGGATGATGACTCCTGGCTTTATGGTGGGGAGGAAGAGTTGAACTCTGTTCTTGCAGAGAGACAAAGGAGTGGGTATTTTCAAGGGCAGCTTCCAGGGTCTAAAGAGTATAAGAGGTTGATGGAGAATGCTGAGGAATATTACAGGAAGAGTACCTTGCATCACAGGGTCAGTGAAATGTTAGGTAATCCTGTGAGGTGTATTGATGAGCTTCTTGCTTTACCATATTCACTGGATGATTTTAAAAGTGAAGAAGTTCCTCCATCGGATGATGACTCCTGGCTTTATGGTGGGGAGGAAGAGTTGAACTCTGTTCTTGCAGAGAGACAAAGGGAGATGGAGCTCTTTGAACAGCAACAGAAAGGGAAACAGAAAGGAAAGGATAAGGTTGTTGATAATGATTCATCCAACCTAAGTAAGAATGATTTTGATTTAGGAGATATAGCAAAATCTATGAAGTCGTTTGTTCATAAAGTATCGAGTTATCAAGGAGCAGAGGTCTCTGAGAACAGGGACCTGAAAGACGTGGAGTTTGACATGGAGCGTTTTATGAAAGAGTTGGAATCAGTAGCCAGGCCTCGAGCCAGCAGAGATGATGAAAGTGATGTTGATGCTGAGGAAGGATCTTCTTCGGATATGGATTTTGATGAATTTGATGATGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_276700.p1 GENE.R_Transcript_276700~~R_Transcript_276700.p1 ORF type:internal len:243 (-),score=87.45,SGT1|PF07093.7|1.5e-07,SGT1|PF07093.7|5.4e-41 R_Transcript_276700:3-728(-)
IDELLALPYSLDDFKSEEVPPSDDDSWLYGGEEELNSVLAERQRSGYFQGQLPGSKEYKRLMENAEEYYRKSTLHHRVSEMLGNPVRCIDELLALPYSLDDFKSEEVPPSDDDSWLYGGEEELNSVLAERQREMELFEQQQKGKQKGKDKVVDNDSSNLSKNDFDLGDIAKSMKSFVHKVSSYQGAEVSENRDLKDVEFDMERFMKELESVARPRASRDDESDVDAEEGSSSDMDFDEFDDE

Click here to download the sequence:
Link to NCBI Protein BLAST