Transcript Information: R_Transcript_276907.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value4E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0908143996844
Replicate 20.25095179780436
Replicate 31.0038809305087
Condition 2: 8 Hour
Replicate 11.3657454552248
Replicate 21.1581333224518
Replicate 30.86780608543683
Condition 3: 24 Hour
Replicate 11.5549112464979
Replicate 21.1423042453287
Replicate 31.4824341819811


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_276907.p1 GENE.R_Transcript_276907~~R_Transcript_276907.p1 ORF type:3prime_partial len:251 (+),score=23.59,RVT_1|PF00078.23|3.4e-26 R_Transcript_276907:41-790(+)
ATGGATTATGGGCTAATTGAGGAAATCAACCCACTTTCAATTGGAGACAATAGAGGCCTAATGGAGGTGAAGCTGGACATGAGTAAGGCTTATGATCGGGTTGAATGGAATTTTTTGGAGAGTATTATGCTTAAATTGGGCTTCTTGCCGGACTGGGTTAACATGGTTATGAAGTGTGTGACTTCGGTCTCTTACTCATTTTTAGTTAATGGGGAACCGAAAGGTTTTCTCAAGCCTACTCGTGGAATTAGACAAGGGGATCCTTTATCCCCCTATCTATTTCTACTTTGTGCGGAAGGCCTTTCGCATTTATTATCCCATTCAGTAATACATGATGGTTTTATTGGTCATACAATTTGTCAAGGTGCTCCTATGGTCTCTCACCTTTTGTTCGCAGATGATACTATAATATTTGCGAAAGCCGACACTGCTCATGCAAACAAGATGGTGGACATCCTACATCTTTACGAGAAAGCATCAGGGCAACAGATTAATAAGGAGAAGACTACTTTGTCTTTTAGCAAGGGCATCCCTACGAGTACAAGAGCTGAGATAACTCAAGTGCTAGGGGTACATCAAGTGGAACAACATGACAAATATTTGGGGCTCCCAACCCATATTGGCCGGTCCAAAAAAAAGGCTTTTCTCCCTATTAAAGACAGGGTGCAAAAGAAGCTTCAAGGGTGGATGGATAAGTATCTCTCATGGTCAGGTAAGGAAGTTCTTATTAAGGCAGTAGCCCAAGCTATT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_276907.p1 GENE.R_Transcript_276907~~R_Transcript_276907.p1 ORF type:3prime_partial len:251 (+),score=23.59,RVT_1|PF00078.23|3.4e-26 R_Transcript_276907:41-790(+)
MDYGLIEEINPLSIGDNRGLMEVKLDMSKAYDRVEWNFLESIMLKLGFLPDWVNMVMKCVTSVSYSFLVNGEPKGFLKPTRGIRQGDPLSPYLFLLCAEGLSHLLSHSVIHDGFIGHTICQGAPMVSHLLFADDTIIFAKADTAHANKMVDILHLYEKASGQQINKEKTTLSFSKGIPTSTRAEITQVLGVHQVEQHDKYLGLPTHIGRSKKKAFLPIKDRVQKKLQGWMDKYLSWSGKEVLIKAVAQAI

Click here to download the sequence:
Link to NCBI Protein BLAST