Transcript Information: R_Transcript_276936.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value3E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.13724030793022
Replicate 20.15786692042329
Replicate 30.34446221949101
Condition 2: 8 Hour
Replicate 10.18410424772365
Replicate 20.16812693113673
Replicate 30.13647827534126
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.65827683268864


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_276936.p1 GENE.R_Transcript_276936~~R_Transcript_276936.p1 ORF type:5prime_partial len:133 (+),score=11.29 R_Transcript_276936:3-401(+)
TCTGCTCAAGGTAGAGTTTGCAAGGTGTCCAAGGTTGTTCTTGTTGTTATGAAAGGCTCTTGCAAGGTTCCATCATCACGGGTTCCACTGCCATTGTTTCCACATCCACTATCGATGAATGTAAGCTTTGGCATATGTTTAGGGCATATGAGAGAAAAAGGTATGGATATTCTTTCTAAGTGTGGTTTACCTGGTTCACTTACTCATTCTAACCTTACTTTTTGTGAGCATTGCATGTATGGCAAGCAAAAGAGAGTAAGCTTTGGGCCCGCTATTCACAATACCAAAGGCACACTTGATTATGCGCATTCTGATTTGTGGGGCCCTTCTCAAGTGACTACGATCAGAGGCAATAGATATATAATGACTATAATTGATTATTACTCTCGAAAGGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_276936.p1 GENE.R_Transcript_276936~~R_Transcript_276936.p1 ORF type:5prime_partial len:133 (+),score=11.29 R_Transcript_276936:3-401(+)
SAQGRVCKVSKVVLVVMKGSCKVPSSRVPLPLFPHPLSMNVSFGICLGHMREKGMDILSKCGLPGSLTHSNLTFCEHCMYGKQKRVSFGPAIHNTKGTLDYAHSDLWGPSQVTTIRGNRYIMTIIDYYSRKV*

Click here to download the sequence:
Link to NCBI Protein BLAST