Transcript Information: R_Transcript_27701.p1


Annotated TAIR IDAT3G53720.1
Annotated Gene Namecation/H+ exchanger 20
Annotated Gene Symbol(s)ATCHX20, CHX20
Annotation TypeHomolog
Chromosome Positionchr3:19905826-19910027 | Reverse length=842
E-Value4E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 133.866939602731
Replicate 224.411361327383
Replicate 333.946129208756
Condition 2: 8 Hour
Replicate 113.275468947302
Replicate 218.723870939306
Replicate 315.745975477926
Condition 3: 24 Hour
Replicate 111.340603570312
Replicate 210.629040429194
Replicate 311.075705986141


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_27701.p1 GENE.R_Transcript_27701~~R_Transcript_27701.p1 ORF type:5prime_partial len:166 (+),score=37.91 R_Transcript_27701:1-498(+)
TTCTTCTTTGATTTGTTTTTCTCTCAATATTGTGTGTGTGTTGATTCGATCGGAACGCCTTCGATCCTAACAAATGGGAGCAATTACTATACTTTCTCAGTTGCTACCATGAATTGGGAGCAAGAAAGGGGCCTAGATGACACAATGGTGACAGAATTTCGTAGCAAGAGGGATGGAAGAATAGAATACATAGAGAAAGAAGCACACAAGATTGAAGAAATAGTGCTATCACTTGGGCAAGCCCAAGATTATGACCTAATAATTGTAGGCAAAGGAAGGTTCCCTTCAAGAATGATGGCAGAGCTAGCTGATCGCCAGGCTGAGCATGCAGAGCTAGGCCCTGTGGGTGACATCTTATCATCCTCTGACAAGGCTGTAATTTCCTCTGTCTTGGTAGTTCAGCAACATGATTTGGCACATATTGAGCAAATGCCATTCTCAAAGTTGGTCCATAATGAACAACAAGTTGGTGATCAGGAGATTTGCAACCAAGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_27701.p1 GENE.R_Transcript_27701~~R_Transcript_27701.p1 ORF type:5prime_partial len:166 (+),score=37.91 R_Transcript_27701:1-498(+)
FFFDLFFSQYCVCVDSIGTPSILTNGSNYYTFSVATMNWEQERGLDDTMVTEFRSKRDGRIEYIEKEAHKIEEIVLSLGQAQDYDLIIVGKGRFPSRMMAELADRQAEHAELGPVGDILSSSDKAVISSVLVVQQHDLAHIEQMPFSKLVHNEQQVGDQEICNQV*

Click here to download the sequence:
Link to NCBI Protein BLAST