Transcript Information: R_Transcript_277118.p1


Annotated TAIR IDAT5G60710.1
Annotated Gene NameZinc finger (C3HC4-type RING finger) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:24410953-24414849 | Reverse length=704
E-Value3E-48
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.65448863981063
Replicate 20.08365059926812
Replicate 30.091261902773516
Condition 2: 8 Hour
Replicate 10.097553246801774
Replicate 20.35634871460057
Replicate 30.21695152135921
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_277118.p1 GENE.R_Transcript_277118~~R_Transcript_277118.p1 ORF type:complete len:251 (+),score=54.71,VWA|PF00092.24|1.4e-12,zf-RING_11|PF17123.1|4.4e-11,zf-RING_11|PF17123.1|1.7e+03,zf-RING_2|PF13639.2|7.4e-10,VWA_3|PF13768.2|9.2e-08,VWA_2|PF13519.2|1.2e-07,zf-C3HC4|PF00097.21|2.8e-06 R_Transcript_277118:1791-2543(+)
ATGATGCGGGAAACATGTGCAATATGCTTGGGAAGCATGAAAGCAGGGAATGGGAGAGCATTGTTCACAGCACAATGTTCACACATCTTCCACTTCAACTGCATTACTTCCAGTGTTCAACATGGCAACCACATTTGCCCAATTTGCCGTTCAACTTGGACTGATCTCCCTTCACAAGTCTTGCCTGGTCCTCAATTCAACTATCAACAACCTTTTTTCAACCCTCCTAATTTCAACTTCAATGTTCAGCCAGCTCCATTATTCTCTTCACTACCGCCTATGTTCACAAACTCAGACGACTTTGCTGATGATGAGCCTCTTCCAACCCCAGTTTCGGAACCTGATCATGAGGCATCATCCTCGGCCCCACCACAGGGTGATACGCTAATTGTCAAGGCCTTGCCTGAGTGTGCTGCACTGAGCAGATCAGAACGGTCTACATCATTTGCTGTCCTTGTGGGAGTTTGTGCCCCTCCTCTATCTCCGGAAGCTACAGACAGGCCTGGCATCCGTGCTCCTCTTGACTTGGTGGCTGTCCTTGATGTGAGTGGCAGTATGGATGGGGGCAAGATCAGGCTGCTTAAGCAGGCTGTCAACTTTGTTGTCGACAACCTTGGCCCAACAGATCGATTTTCTATCATCACATTCTCGACTTCTGCTCGGAGGGTGACACCACTGAGAAGGATGACAGACATGGGAAAAACTGAAATGGCTCAGGCTGTGAACTTGATCGAACCCCAAGTGCAGGGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_277118.p1 GENE.R_Transcript_277118~~R_Transcript_277118.p1 ORF type:complete len:251 (+),score=54.71,VWA|PF00092.24|1.4e-12,zf-RING_11|PF17123.1|4.4e-11,zf-RING_11|PF17123.1|1.7e+03,zf-RING_2|PF13639.2|7.4e-10,VWA_3|PF13768.2|9.2e-08,VWA_2|PF13519.2|1.2e-07,zf-C3HC4|PF00097.21|2.8e-06 R_Transcript_277118:1791-2543(+)
MMRETCAICLGSMKAGNGRALFTAQCSHIFHFNCITSSVQHGNHICPICRSTWTDLPSQVLPGPQFNYQQPFFNPPNFNFNVQPAPLFSSLPPMFTNSDDFADDEPLPTPVSEPDHEASSSAPPQGDTLIVKALPECAALSRSERSTSFAVLVGVCAPPLSPEATDRPGIRAPLDLVAVLDVSGSMDGGKIRLLKQAVNFVVDNLGPTDRFSIITFSTSARRVTPLRRMTDMGKTEMAQAVNLIEPQVQG*

Click here to download the sequence:
Link to NCBI Protein BLAST